Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0464 ATGGGTTCGGAGAAGCCTCATGCAGTTTGTATTCCATACCCTGCTCAGGGCCATATCAATCCTATGCTAAAACTAGCAAAGCTCCTCCATTGCAGAGGTTTTCGTATCACCTTTGTCAACACAGAGTTCAACCACACACGCTTACTCAATGCCCAGGGCCCCAACTGCCTCAGTGGTCTCCCCACCTTTCAGTTCGAAACCATTCCCGATGGTCTCCCCCCGTCCGACGTCGACGCAACCCAAGACATTCCTTCCCTCTGTGTATCCACCAAAAAGAACTGCTTGGCTCCCTTTAGACGCCTTCTCGCCAAACTCAACCACGACGGTCCTCCCGTCACTTGCATATTTTCTGACGCTATCATGAGCTTCACTTTAGACGCTGCTCAAGAACTCGGCATTCCCGACCTTCTTTTATGGACAGCTAGTGCTTGTGGCTTCATGGCCTATGTGCAGTATCGCAGTCTCATCGACAAGGGTTTTACACCACTCAAAGATGAGAGTTATCTAACAAATGGGTATTTGGATACTGTTGTCGATTGGATACCGGGCATGAAAGGTATCCGTTTGAAGGATCTCCCGAGCTTCATTCGGACTACCGATCCAGATGATGTGATGCTGGACTTTGCCATGGGTGAGCTTGAAAGGGCTCGCAAGGCTTCTGCCATCATTTTCAATACGTTTGACGCTTTAGAGCATGAGGTTTTGGATGCAATTGCTCCCATGTATCCCCCAATCTACACCATCGCTCCTCTTCAGCTACTTCTGGATCAGATTCACGATAGCGAACTACAGTTGATTGAATCAAATCTGTGGAAGGAAGAGCCCGAGTGTCTCAAATGGCTGGATTCCAAAGAACCCAACTCTGTTGTTTACGTTAATTATGGAAGCATCACAGTCATGACTCCCCAGCAACTGATTGAGTTTGCTTGGGGACTTGCAAATAGCAATCAAAGCTTCTTGTGGATACTTAGGCCAGATCTCGTGTCTGGTGAGTCAGCCATTCTGCCACCAGAATTCGTGGCAGAAACCGAAGACAGGGGTTTACTAGCAGGTTGGTGTCTTCAAGAGCAAGTTCTCACCCACCAGGCCATTGGCGGCTTCTTAACTCATAACGGCTGGAATTCCATAATCGAGGGTTTATGCGCTGGAGTGCCTATGATTTGTTGGCCTTTTTTTGCAGAGCAGCAAACCAACTGTCGTTACTGCTGCACTGAGTGGGGCGTAGGAATGGAGATAGACAGTGATGTTAAGAGGGATGAAGTTGCAAAGCTTGTGAGGGAGTTGATGGAGGGAGAGAAAGGCAAAGAAATGAAAAAGAAAACCATGGAGTGGAAGCATACGGCAGAAGCGGCTACCACTGGTCCAGATGGATCATCTTACCTGAATTTGGAAAAAATGTTTGAACACGTGCTTCTCTAG 1419 0.4792 MGSEKPHAVCIPYPAQGHINPMLKLAKLLHCRGFRITFVNTEFNHTRLLNAQGPNCLSGLPTFQFETIPDGLPPSDVDATQDIPSLCVSTKKNCLAPFRRLLAKLNHDGPPVTCIFSDAIMSFTLDAAQELGIPDLLLWTASACGFMAYVQYRSLIDKGFTPLKDESYLTNGYLDTVVDWIPGMKGIRLKDLPSFIRTTDPDDVMLDFAMGELERARKASAIIFNTFDALEHEVLDAIAPMYPPIYTIAPLQLLLDQIHDSELQLIESNLWKEEPECLKWLDSKEPNSVVYVNYGSITVMTPQQLIEFAWGLANSNQSFLWILRPDLVSGESAILPPEFVAETEDRGLLAGWCLQEQVLTHQAIGGFLTHNGWNSIIEGLCAGVPMICWPFFAEQQTNCRYCCTEWGVGMEIDSDVKRDEVAKLVRELMEGEKGKEMKKKTMEWKHTAEAATTGPDGSSYLNLEKMFEHVLL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0464 472 CDD GT1_Gtf-like 6 428 IPR002213 GO:0008194
Vvi18g0464 472 Gene3D Glycogen Phosphorylase B; 272 450 - -
Vvi18g0464 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 465 - -
Vvi18g0464 472 Gene3D Glycogen Phosphorylase B; 7 453 - -
Vvi18g0464 472 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 464 - -
Vvi18g0464 472 FunFam Glycosyltransferase 272 450 - -
Vvi18g0464 472 FunFam Glycosyltransferase 7 266 - -
Vvi18g0464 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 279 436 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0464 Vvi-Chr18 4584527 4586041 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0464 3 472 Glycosyltransferase AT1G22400 61.263 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0464 - - vvi:109121485 962.6