Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0462 ATGGGTTCCGTGGAGAAGAAGCCTCATGCAGTTTGTATTCCATTCCCTGCTCAGGGCCACATCAAGCCAATGCTAAACCTAGCAAAGCTCCTCCATTTCAGAGGCTTTCATATTACCTTCGTCAACACAGAGTTCAACCACAGACGCTTGCTCAAGGCCCGGGGTCCCAACTCCCTCGACGGTCTCCCCTCCTTTCAGTTCGAAACCATTCCCGATGGTCTCCAACCGTCCGATGTCAACGCAACCCAAGACATCCCTTCCCTCTGCGTCTCCACCAAAAATAACTTATTGCCTCCGTTTCGATGCCTTCTCTCCAAACTCAACCACAACGGTCCTCCCGTCACTTGCATAGTTTCTGACAGTTCATTGACCTCCACTCTGGACGCAGCTCAAGAACTGGGCATTCCCGGCCTTCTCTTTTGGACGGCTAGCGCTTGTGGCTTCATGGGCTATGCGCACTATCGCACTCTCGTCAACAAGGGTTTTATACCACTCAAAGATGCAAGTTACCTAACAAATGGGTACTTGGATACGGTTATTGATTGGATACCGGGCATGAAAGGTATCCGTTTGAAGGACATGCCAAGCTTCGTTCGGACTACCGATCCAGATGATGTTATGTTGGGCTTTGCCATGGGTGAGATTGAAAGAGCTCGCAAGGCTTCTGCCATCATTTTCAATACGTTTGACGCTTTAGAGCACGAGGTGTTGGATGCAATTTCGACCATGTATCCTCCTATTTACACCATCGGCCCTATATCGCTACTCATGAATCAGATCCAGGATAAAGATTTGAAGTCGATTGGATCAAATCTGTGGAAGGAAGATGAGGAGTGTCTCCAATGGCTCGACTCCAAAGGACCCAACACGGTGGTCTACGTGAATTTTGGTAGCATCACAGTCATGAAGCCGGAGCATCTGATCGAGTTTGCTTGGGGACTTTCAAATAGCAAACAAAAATTCTTATGGATAATTAGGCCAGATCTGGTGTCTGGTGCTTCGGCCATTCTTCCGCCCGAATTCCTGACAGAGACCAAAGATAGGGGTCTACTCGCAAGTTGGTGCTCTCAAGAGCAAGTTCTGGGCCACCCAGCGGTAGGCGGGTTTTTAACCCACAACGGATGGAATTCCATCCTCGAAAGTGTGTGTTGCGGAGTGGCAATGATTTGTTGGCCCTTTTTCGCAGAGCAGCAAACCAACTGCCGCTACTGTTGCACAGAATGGGGCATAGGTATGGAGATAGACGGTGACGTTAAGAGAGATGATGTTGAGAGGCTTGTGAGAGAATTGATGGAGGGAGAGAAAGGCGAGGAGATGAAGAAGAAGACCATGGAGTGGAAGAAGATTGCGCATGAGGCCACCACTGCTCCAAGTGGTTCCTCGTTCTTCAACTTGGACAGAATGATCAAACAACTGCTTCTGTAG 1425 0.4905 MGSVEKKPHAVCIPFPAQGHIKPMLNLAKLLHFRGFHITFVNTEFNHRRLLKARGPNSLDGLPSFQFETIPDGLQPSDVNATQDIPSLCVSTKNNLLPPFRCLLSKLNHNGPPVTCIVSDSSLTSTLDAAQELGIPGLLFWTASACGFMGYAHYRTLVNKGFIPLKDASYLTNGYLDTVIDWIPGMKGIRLKDMPSFVRTTDPDDVMLGFAMGEIERARKASAIIFNTFDALEHEVLDAISTMYPPIYTIGPISLLMNQIQDKDLKSIGSNLWKEDEECLQWLDSKGPNTVVYVNFGSITVMKPEHLIEFAWGLSNSKQKFLWIIRPDLVSGASAILPPEFLTETKDRGLLASWCSQEQVLGHPAVGGFLTHNGWNSILESVCCGVAMICWPFFAEQQTNCRYCCTEWGIGMEIDGDVKRDDVERLVRELMEGEKGEEMKKKTMEWKKIAHEATTAPSGSSFFNLDRMIKQLLL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0462 474 Gene3D Glycogen Phosphorylase B; 274 452 - -
Vvi18g0462 474 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 8 462 - -
Vvi18g0462 474 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 223 458 IPR002213 GO:0008194
Vvi18g0462 474 FunFam Glycosyltransferase 9 269 - -
Vvi18g0462 474 CDD GT1_Gtf-like 8 463 IPR002213 GO:0008194
Vvi18g0462 474 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 469 - -
Vvi18g0462 474 Gene3D Glycogen Phosphorylase B; 9 455 - -
Vvi18g0462 474 FunFam Glycosyltransferase 274 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0462 Vvi-Chr18 4564181 4565715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0462 6 474 Glycosyltransferase AT1G22400 59.494 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0462 - - vvi:100245403 956.822