Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0461 ATGAGAGAGGGAGAAGAAGAGGGTGAGAGTTCCATGGCAATGGCCGAGAAGCCTCGCCCTCATGCGGTATGTGTTCCGTTCCCAGCTCAAGGCCACATAAACCCCATGATGAAATTAGCAAAGCTCCTCCACCATAAAGGTTTTCACATCACCTTCGTTAACACAGAGTTCAATCATCAACGCCTGCTGAAATCCAGAGGTCCCAACTCCCTTCGTGGTCTACCCTCCTTCCAATTCGAAACCATTGCAGACGGCCTCCCTCCATCAGATATCGATGCCACCCAAGATGTCCCGTCCCTCTGCGCCTCCACCCACAACGACTGCCTAGCTCCCTTCCGAGACCTCCTCGCCAAACTTAACGACACTTCTTCATCCAAAGTCCCTCCAGTAACTTGCATAGTTTCAGATGGTATCATGAGCTTCACTCTCAAGGCTGCTGAAGAACTAGGCATTCCTGAAGTATTTTTCTGGACAACCAGTGCTTGTGGCTTCATGGGTTACGTGCAGTATCGCCATCTCATTGATAGAGGTTTTTTCCCACTAAAAGATGAGAGTTGTCTAACAAATGGGCACTTGGACACTGTCGTAGACTGGATACCAGCTATGAAAGGCGTGCGTTTGAGGGATTTACCAAGCTTTATTAGAACAACAAACCCAGATGATATTGTGGTGAATTTTGCCATGGGAGAAGTTGAGAGAGCCAATGATGCTTCTGCTATCCTCTTAAATACGTTTGATGAATTAGAGCATGAGGTTCTGCAGGCACTTTCAACCATGTTTCCTCCTATTTACACCATCGGTCCCCTACAGCTATTGCTGAATCAGATGCCAGACAATGATTTAAAGTCTATAGAATCGAACTTATGGAAAGAAGAACCAGGGTGTCTTGAGTGGCTCGACGCTAAAGAACCTGAGTCTGTTGTGTACGTGAATTTTGGCAGTGTCACAGTCATGACACCCCAACAACTGGTTGAATTTGCTTGGGGTCTTGCTAATGCCAATCTGAAATTTTTGTGGATAATCAGGCCAGATCTTGTTGCCGGAGATGCTGCCATTCTTCCAGCAGATTTCGTGGCACAGACAAAAGAAAGGAGTTTGTTAGCAAGTTGGTGCCCTCAAGAACGAGTTCTCACACACCCTGCAATTGGAGGGTTTTTAACACACAGCGGCTGGAATTCCACAATTGAAGGCTTGTGCGGCGGGGTACCCATGATCTGTTGGCCCTTCTTTGCAGAGCAGATGACCAACTGCAGATATTGTTGCACAGAGTGGGGCGTAGGCATGGAGATAGGCAATGATGTTACGAGAGATGAAGTTGAGAGCCTTGTGAGAGGTTTGATGGAAGGAGAGAAAGGTAAAGAGATGAAGAAGAAAGCAATGGAATGGAAAAGGATGGCAGAAGCAGCCACTACCACTCCGGCTGGTTCATCTTACTCAAATCTGGACAAAATGATTAACCAAGTGCTTCTCTCCAAATCACCATGTTAA 1488 0.4677 MREGEEEGESSMAMAEKPRPHAVCVPFPAQGHINPMMKLAKLLHHKGFHITFVNTEFNHQRLLKSRGPNSLRGLPSFQFETIADGLPPSDIDATQDVPSLCASTHNDCLAPFRDLLAKLNDTSSSKVPPVTCIVSDGIMSFTLKAAEELGIPEVFFWTTSACGFMGYVQYRHLIDRGFFPLKDESCLTNGHLDTVVDWIPAMKGVRLRDLPSFIRTTNPDDIVVNFAMGEVERANDASAILLNTFDELEHEVLQALSTMFPPIYTIGPLQLLLNQMPDNDLKSIESNLWKEEPGCLEWLDAKEPESVVYVNFGSVTVMTPQQLVEFAWGLANANLKFLWIIRPDLVAGDAAILPADFVAQTKERSLLASWCPQERVLTHPAIGGFLTHSGWNSTIEGLCGGVPMICWPFFAEQMTNCRYCCTEWGVGMEIGNDVTRDEVESLVRGLMEGEKGKEMKKKAMEWKRMAEAATTTPAGSSYSNLDKMINQVLLSKSPC* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0461 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 20 484 - -
Vvi18g0461 495 Gene3D Glycogen Phosphorylase B; 284 468 - -
Vvi18g0461 495 Gene3D Glycogen Phosphorylase B; 21 471 - -
Vvi18g0461 495 FunFam Glycosyltransferase 290 468 - -
Vvi18g0461 495 ProSitePatterns UDP-glycosyltransferases signature. 370 413 IPR035595 -
Vvi18g0461 495 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 20 483 - -
Vvi18g0461 495 CDD GT1_Gtf-like 20 444 IPR002213 GO:0008194
Vvi18g0461 495 FunFam Glycosyltransferase 21 285 - -
Vvi18g0461 495 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 223 454 IPR002213 GO:0008194
Vvi18g0461 495 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0461 Vvi-Chr18 4550434 4552215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0461 11 494 Glycosyltransferase AT1G22380 60.700 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0461 - - vvi:100267717 973.385