Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0456 ATGTCCAGGGCTATGCACAGAGGTGTATCTGGGTTACGGATCTCTGGGAACAGTCATGATTCCCGGGACTCTCAAATGAAAGTTAAAACAGAGAAGGAGGATTCTGAAAAAAATCGGTCTTCTGATCACACCTGTTTATCTTTCAAATTCCCTAGTGTACCCTTCCCAGATAATTCTTCATCGAAGCATGGTATTAGTGAGAATGGTTTTGCATCTGATACCTTCAGTGCTGGAAGTCCAAGAAGCCGCCACAAATTAACTATGCTCGTCCTCAAGTTGAGCTTAGTTCTGATTGTAGTTCTGGCCCTTACTGGATCTTTCTTGTGGACAATCTCCATTACAACCTCATCAAGAGGTCAAATATTTCATTCTCATGGTTATAGGCGACTCTATGAGCAACTTGTTTCAGACCTATGGGATATTGGAGAGCTCTCTCTTGGCCCTGCAAGGTTGAAAGAAGTAGAATTCTGTCCTTTGGAATATGAAAATCATGTTCCTTGCTTCAATGTCTCTGAGAGTCTTGCTCTGGGTTATTCTGATGGAGAAGAGTTAAATCGTCGCTGTGGGCATGGGATAAGGCAAAATTGCTTATTTCCTCCCCCTGTGAATTATAGGATTCCTCTTAGGTGGCCCACTGGAAGAGATATCATTTGGGTTGCAAATGTTAAAATTACTGCACAAGAGGTACTATCCTCTGGTAGCTTGACCAAGAGGATGATGATGTTGGAGGAAGAGCAGATTTCCTTCCGTTCAGCCTCTCTTATGTTTGATGGAGTTGAAGACTACTCACATCAAATTGCAGAAATGATTGGGCTGAGAAATGAATCCAACTTCATTCAAGCTGGGGTTCGGACCATCTTGGATATAGGATGTGGTTATGGTAGCTTTGGAGCACATCTCTTTTCAAAAGAGATCTTAACTATGTGCATTGCAAGCTATGAGGCTTCAGGCAGTCAAGTTCAACTAACTCTTGAGAGAGGTCTTCCTGCAATGATTGGTTCATTTACTTCAAAGCAGATGCCATATCCATATCTTTCCTTTGATATGGTGCATTGTGCTCGATGTGGCATTGACTGGGACCAAAAAGATGGCATTCTCTTGATTGAAGTTGATAGAGTTTTGAGGCCAGGAGGATACTTTGTTTGGACTTCACCTCTTACCAATGCTCAGAGGTTCCTTCGTAACAAAGAGATGCAGAAGAGGTGGAACTTCGTACGTAACTTTGCAGAAAATCTCTGCTGGGAAATGTTATCACAGCAAGATGAAACTGCTGTATGGAAAAAGACCAGTAAAAAGAGTTGTTATGCTTCTCGGAAACCTGGTTCAGGCCCTTCAATTTGCAGTAAACGCCATGATGGTGAATCTCCATATTATCGGCCACTGGAAGCCTGCATAGGGGGGACTCAGAGCAGCCGATGGATTCCTATAAAAGCAAGGACAACCTGGCCTTCTAGAGCTAAATTGAACTCGAGTGAACTTCAAATTTATGATCTACATTCGGAAGAGTTTGCTGAAGATACCCAACATTGGAACTTAGCCATTCGCAATTATTGGTCACTTCTGTCACCACTAATATTCTCAGATCATCCAAAGAGACCTGGTGATGAGGATCCTTCTCCACCTTTTAACATGCTCAGGAATGTGCTAGACATGAATGCACATCTAGGCGGTTTCAATTCTGCTTTATTGGAAGCCGGGAAATCTGTGTGGGTTATGAACGTGGTCCCTACAATTGGGCACAATTACCTTCCCTTGATCCTGGATAGAGGATTTGTTGGCGTATTGCATGACTGGTGCGAAGCATTTCCAACATACCCTAGAACTTATGATATGGTGCATGCTGCTGGACTTCTATCTCTTGAAACTAGTCAGCAGCGCAGGTGCACCATGCTCGATCTATTCACAGAGATAGACCGGTTACTTCGTCCAGAGGGGTGGGTGATACTTCGGGATACCGTTTCTCTTATTGATTCAGCAAGAATGCTCATAACAAGGCTGAAATGGGATGCACGAGTTGTGGAGATTGAGAGTAACAGTAATGAGAGATTGCTGGTCTGCCAGAAACCTTTCTTTAAGCGACAAACAAACTGA 2091 0.4323 MSRAMHRGVSGLRISGNSHDSRDSQMKVKTEKEDSEKNRSSDHTCLSFKFPSVPFPDNSSSKHGISENGFASDTFSAGSPRSRHKLTMLVLKLSLVLIVVLALTGSFLWTISITTSSRGQIFHSHGYRRLYEQLVSDLWDIGELSLGPARLKEVEFCPLEYENHVPCFNVSESLALGYSDGEELNRRCGHGIRQNCLFPPPVNYRIPLRWPTGRDIIWVANVKITAQEVLSSGSLTKRMMMLEEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQAGVRTILDIGCGYGSFGAHLFSKEILTMCIASYEASGSQVQLTLERGLPAMIGSFTSKQMPYPYLSFDMVHCARCGIDWDQKDGILLIEVDRVLRPGGYFVWTSPLTNAQRFLRNKEMQKRWNFVRNFAENLCWEMLSQQDETAVWKKTSKKSCYASRKPGSGPSICSKRHDGESPYYRPLEACIGGTQSSRWIPIKARTTWPSRAKLNSSELQIYDLHSEEFAEDTQHWNLAIRNYWSLLSPLIFSDHPKRPGDEDPSPPFNMLRNVLDMNAHLGGFNSALLEAGKSVWVMNVVPTIGHNYLPLILDRGFVGVLHDWCEAFPTYPRTYDMVHAAGLLSLETSQQRRCTMLDLFTEIDRLLRPEGWVILRDTVSLIDSARMLITRLKWDARVVEIESNSNERLLVCQKPFFKRQTN* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0456 696 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 163 688 IPR004159 GO:0008168
Vvi18g0456 696 CDD AdoMet_MTases 285 381 - -
Vvi18g0456 696 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 546 667 IPR029063 -
Vvi18g0456 696 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 200 393 IPR029063 -
Vvi18g0456 696 MobiDBLite consensus disorder prediction 20 43 - -
Vvi18g0456 696 MobiDBLite consensus disorder prediction 1 45 - -
Vvi18g0456 696 FunFam probable pectin methyltransferase QUA2 245 429 - -
Vvi18g0456 696 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 30 691 IPR004159 GO:0008168
Vvi18g0456 696 Gene3D Vaccinia Virus protein VP39 256 439 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0456 Vvi-Chr18 4494914 4503241 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0456 K23870 - vvi:100262559 1410.97