Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0455 ATGGCGTGGTGGTGGCGCCGGCTCATCCTAAGCTCCAAACTCTCCCAGTACAAAACCCTACTCCCTCCCATCTCTTCAAACCCTAAACCCTTAATCTCCTTCTTCTCCACCTCCTTCCTTCGCACCAAAACCCCAAAAAAGCACAAGAAAAGGAGAAAACCCAAGGAAAGTCCCAGAACCAAACTCGTTCAGTCGGAGCCTAATCGCCTCTCCCACTTTGAACTACTTGTCCAACGCGACTCCTTCTTCAGATTCTTCACCAAATCAAAAGATTTTCTCTCCAAACAGCCCGACCACGTCCTCCGCTTCGATGACGCCGGCAAACTCCACCGCGAGCTAGGCTTTCCCCGTGGCCGCAAAGTCATCCGCTCCATCCAGCGCCACCCCTTGATTTTCGAGACGTATCGACACACCGATGGAAAAATGTGGTTCGGCTTTACGGATTTTATGGAGGACCTATTGGAGGAAGAGAAATCCATTATGGAGTCTATGGAGACGGAAAGAGTTACTACGGTGCGGAAACTGCTAATGATGTCTGCCAAGAAGCGGATTCCGTTGAGTAAAATTTATCACTGTAGGGCATTGTTTGGGATTCCGGAGGATTTTAGGGACCGGGTTTCCAAGTATCCGAATTATTTCAAAATTGTGGTTGAAGATGATGGGAAGAGAGTGCTTGAACTAGTGAATTGGGATCCATTGTTAGCCGTGAGTGCGCTGGAGAGGGACTTTATGATTGATGAGGATCGGGTTAAGAAGGCATTTAAGTTTCCAGTGAAACATGGGAAGGACTTGGACTTGGATGAGGGTGATGTGAGGAAGTTGAATTTGTTGAACACTCTCCCGCTCGTCTCGCCATACTCGGATGGATCAGGATTAAATATTTGGACTTTGGAGGCAGAGAAGTATAGGGTTGGGGTGTTGCATGAGTACTTGAGCATGACATTGGAGAAGAGGGCTTCTATACATCATATAGTGGAGTTCAAAGAAGAGTTCAGTTTGACTAAGCATACCTATCAGATGCTTCTGAAGCAGCCCAGGACATTTTATTTGGCAGGGACGGAGATGAATTGGGTTGTTTTCTTGAGAGATGCTTATGATGAAAATGGAGTCTTGATGAATAAGGATCCACAGGTGGTCTTCAATGAGAAGCTTTTTGAATATGCAGAAATGCAAGATATGGAGTCTGATTCTGGTATAAGAAACAAACGTAGAGGTTAA 1218 0.4606 MAWWWRRLILSSKLSQYKTLLPPISSNPKPLISFFSTSFLRTKTPKKHKKRRKPKESPRTKLVQSEPNRLSHFELLVQRDSFFRFFTKSKDFLSKQPDHVLRFDDAGKLHRELGFPRGRKVIRSIQRHPLIFETYRHTDGKMWFGFTDFMEDLLEEEKSIMESMETERVTTVRKLLMMSAKKRIPLSKIYHCRALFGIPEDFRDRVSKYPNYFKIVVEDDGKRVLELVNWDPLLAVSALERDFMIDEDRVKKAFKFPVKHGKDLDLDEGDVRKLNLLNTLPLVSPYSDGSGLNIWTLEAEKYRVGVLHEYLSMTLEKRASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLRDAYDENGVLMNKDPQVVFNEKLFEYAEMQDMESDSGIRNKRRG* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0455 405 Pfam Plant organelle RNA recognition domain 69 391 IPR021099 GO:0003723
Vvi18g0455 405 MobiDBLite consensus disorder prediction 43 57 - -
Vvi18g0455 405 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 50 396 IPR045040 GO:0003723
Vvi18g0455 405 MobiDBLite consensus disorder prediction 43 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0455 Vvi-Chr18 4491992 4493209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0455 - - vvi:100257435 800.816