Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0450 ATGTCCTGCTTCAGCTTCACCGCAACAAGAGACTGGTGCTATCGCTCCATCTTCACCAAATCGGGTCTTCGATCCACCATCACCGATCTTGGCGACGGCACAGTCATCCACTGTTGGGTCCCCAAGACCCGTAAAGAATCCAAACCCAACCTGCTCCTCATCCACGGCTTCGGAGCCAACGCATTGTGGCAGTGGGGCGACCTCATCCCCTACCTGGTCCCCTACTTCAACGTCTACGTCCCAGATCTCCTCTTCTTCGGGGACTCCTACACCACTAGACCCGAGCGGACCGAGTCGTTCCAGGCCCAGTGCGTGATGCGGGTGATGGAAGCGAAGTCGGTGAAGAAGATGAGTTTGATCGGACTGAGTTATGGTGGTTTTGTGGGGTACAGTATGGCGGCCCAGTTTAAAGAGGCGATAGAAAGAGTGGTGATATGCGGCGCCGGGGTGTGCTTGGAGGAGAAGGATTTGGAAAAGGGTTTGTTTAAGGTATCGCATATAGAAGACGCTGCCAGTATATTGTTGCCCCAAACGCCCGAGAAGCTGAGGGAACTGCTAAGTTACACTTTCTACAAGCCTCCAAGGGGCTTACCTTCTTGCTTGCTCAATGACTTCATTCAAGTAATGTGCACGGAATTTGTAGAAGAGAGAAAAGATTTGATTCGAGCTATTCCTAAAGACCGGAAACTTTCAGAGCTACCCACGATCCCACAGCCTACCTTAATAATTTGGGGAGACCAAGATAAGGTATTCCCGGTGGAACTAGCTCACAGATTGAAAAGGCATTTGGGGGAAGAGGCCCAGCTTGTGATCATCAGTAACGCAGGGCATACTTTTATTATAGAGAAGCCCAAAGAAACATTCAAGTACTTGAAATCCTTTCTCATTGATAATTGA 897 0.4972 MSCFSFTATRDWCYRSIFTKSGLRSTITDLGDGTVIHCWVPKTRKESKPNLLLIHGFGANALWQWGDLIPYLVPYFNVYVPDLLFFGDSYTTRPERTESFQAQCVMRVMEAKSVKKMSLIGLSYGGFVGYSMAAQFKEAIERVVICGAGVCLEEKDLEKGLFKVSHIEDAASILLPQTPEKLRELLSYTFYKPPRGLPSCLLNDFIQVMCTEFVEERKDLIRAIPKDRKLSELPTIPQPTLIIWGDQDKVFPVELAHRLKRHLGEEAQLVIISNAGHTFIIEKPKETFKYLKSFLIDN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0450 298 PANTHER SI:DKEY-122A22.2 4 296 - -
Vvi18g0450 298 Pfam Alpha/beta hydrolase family 51 287 IPR000073 -
Vvi18g0450 298 Gene3D alpha/beta hydrolase 17 297 IPR029058 -
Vvi18g0450 298 PRINTS Epoxide hydrolase signature 75 90 IPR000639 GO:0003824
Vvi18g0450 298 PRINTS Epoxide hydrolase signature 272 294 IPR000639 GO:0003824
Vvi18g0450 298 PRINTS Epoxide hydrolase signature 119 132 IPR000639 GO:0003824
Vvi18g0450 298 PRINTS Epoxide hydrolase signature 238 254 IPR000639 GO:0003824
Vvi18g0450 298 SUPERFAMILY alpha/beta-Hydrolases 24 295 IPR029058 -
Vvi18g0450 298 PRINTS Alpha/beta hydrolase fold signature 133 146 IPR000073 -
Vvi18g0450 298 PRINTS Alpha/beta hydrolase fold signature 240 254 IPR000073 -
Vvi18g0450 298 PRINTS Alpha/beta hydrolase fold signature 119 132 IPR000073 -
Vvi18g0450 298 PRINTS Alpha/beta hydrolase fold signature 75 90 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0450 Vvi-Chr18 4451253 4452493 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0450 - - vvi:100242043 610.912