Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0444 ATGCATAAGCTAGGGTTTTCGGGCCTCAAGAGCTTGGATCAATTCAAATCTTTATCAGGATCCATCCCTGGAACCGCAAAAACCTTTTCCGTTCCTGGTCGTCCATCTTCAGATTCGATCACATTAGGAAGTTTTGCGAATTTGAAGCTCACTGCAGAGAAATTGGTTAAAGAGCAAGCGTCTGTGAAAACTGACCTTGAAATGGCGAATTCTAAGCTGAAGAAATCAATGGAGGATATCCAGATATTGGAGGAAAAGTTGCAGTACGCTCTTAATGAGAATGCAAAGCTCAAAGTGAAGCAGAAAGAGGATGAAAAGCTCTGGACAGGGTTGGAATCAAAATTCTTTTCAACAAAGACCTTATGCGAGCAGCTCACTGAAACTTTGCAGCACTTGGCTTGCCAGGTTCAGGATGCTGAAAAAGATAAGGAACTTTTCGAAGACAAACTATCTGCAAGTTCAGTGGCTTTTGATGGTTTAAATGATCAGATGAATGGTCTGTCTTTGAAATTGGAGTCTGCGGAGGAAAGCATAAAAAATTATGAGAAAGAGCTGAAGGAACTTAAAATTCAGCAAGAGGAAAGGGAGCAGTTTCACAGAGATGAGCAATGCAAAACTGCCAATCTCCTAGAGGAAAAAGATGCTATGATCAAGCAGTTTGAAGCAACTGTAGCTGCTAGTAGGTTGGCCACAGAGAGCTTGAACTCTAAATTGGAAGAAGTGCATATTGAGTTAAGATTGAAAGAAGATGAGTTTAAACATTTGATAGCTTCTCAAGAGAACTTGGAGAAAGAAAAGAGTCATCTTCAATTGAGCAATGATGATTTTGCTAAACGATTAGCCCTATCACTCCACGAGAGAAAAATAATTGAAGATTTGGTTCAAAAGTGGTCTGTAAAGTTGATTGACTTGGATAAACAAAGTTTGAATTTTTCAGACAAGTTTGATCAGCTAAACCACATGAACTGCTCTTATGTCAAGCTGGCTCAGCAGGAGAGAGACCTTGCTGCTAAGCATTCTCAACAACAATACGCTCAACTCCATCGTACATTCTTGTGCATTGCATCTGAAAAAGATGCATTACAGCTGAAAAATCAGGTGTTAAACAATAAGGTTGTTGAACTTCAGGAAGCCCACAATTTTGTAACAGCACAGCTTGCAGAGGAATGCCGCTTAGCAGGGGAGAAAATTCAGACGTTGGAGTCAGAAGTAGAAAATCTTGTCTCAAGGAAGATCGACAAGGAGATGTTAGTTACCAAGTTAGAGGAGATTATTAACACTCAATCAGAAAGTTTGAAATCATCTGAGAATAAAATGAAAGATTTATTACTGAAATTGTCAACACTAGAAACTGAGAACAAAGATAATACTGAGAAATTACAAGCAGAGATACTAAAAAGGGCAGATAAAATAGAAATTCTGCAAAAGGAGGGTGAGAAGGATAAGCAACATGTAGATTCATTGGAGAATCAAGTCAGCCAGCTCCAAAACATCTTGCAGGAGAAGGAACAGCTTATTCTGCAGTATAAGGACAGAGTGAAGCAGCTGGAAGTTCAAAATATAGAGAATCAGGCATTGCTAGATGCTGCTGAGAGTAAAATTACAGAAACCAAGAAGCAATACGATCTGATGCTTGAAACTAAACAATTAGAGTTATCAAGGCATTTGAAGGAAATATCTCAGAGGAATGATCAGGCAATTAATGACATCCGGAAGAAGTATGAGGTGGAGAAATTAGAGATTATCAATCTTGAGAAAGAAAAGATGGATGAAGTTGTCAGGGAAATGGAAAGAAAATGTGACCAGAAACTTGCAGAATGCAAAGAAGAATCAAGGCTGTATTTGATGCACATTCAAGAGGAACACACCAATTTGATCACTCGTATTCAGCAAGAGCATGATAGAAAGGAGCTGAGTCTTAAAGCTGACCACAGTGAAGAGCTTAAACGTGTCCAGCTTCAAGCTGAAGATGACTTGAGAGAGAAAACAATTTTACTCAGAAATGAGCATGAAGTTCAGATTAAAGTCTTGAGACACCAGCATGAGGATGAGTGCAAGAAGCTCCAAGAGGAATTAGATCGTCAGAAGTCCAGAGAAGACAGACAGAGAGCTTTATTGCAATTGCAGTGGAAAGTAATGAGTGACAAAACACAAGAGGATCCAGAAGTGAATTCAAAAAAGGATTACTCCATTTCATCAATTAAGATGAGAGACTCTAGTAACAGAAAAAGAAGTCAGTGTGCACTGGTAAGAGTGGAAAACAGAGAGAAGGATTCACCTTTTCCGGGAGCAACACAAACACCAGTTTCAAACTTGTTGAAGAAAGTAGAGAACGTGAATCCAGGAAGTGCAATAAGTGTTCCCAAACATAGTAAGAAGGTAACTCACCATGAGTATGAAGTTGAGACAACTAATGGAAGAACAATTACAAAACGAAGAAAAACAAAAAGTACAGTCATGTTTGGGGATCCAAGAAAACATAAGAAGGCCAATACACCCAAAGCCCATACTCCCAGAACTATTGTCAAGGAAATTAAGGGAGATAGGCATCTACACCCTTCAAATATAGGCGAGTTATTTTCAGAAGGCTCTCTTAATCCATATGCAGATGATCCTTATGCATTTGATTAG 2631 0.3896 MHKLGFSGLKSLDQFKSLSGSIPGTAKTFSVPGRPSSDSITLGSFANLKLTAEKLVKEQASVKTDLEMANSKLKKSMEDIQILEEKLQYALNENAKLKVKQKEDEKLWTGLESKFFSTKTLCEQLTETLQHLACQVQDAEKDKELFEDKLSASSVAFDGLNDQMNGLSLKLESAEESIKNYEKELKELKIQQEEREQFHRDEQCKTANLLEEKDAMIKQFEATVAASRLATESLNSKLEEVHIELRLKEDEFKHLIASQENLEKEKSHLQLSNDDFAKRLALSLHERKIIEDLVQKWSVKLIDLDKQSLNFSDKFDQLNHMNCSYVKLAQQERDLAAKHSQQQYAQLHRTFLCIASEKDALQLKNQVLNNKVVELQEAHNFVTAQLAEECRLAGEKIQTLESEVENLVSRKIDKEMLVTKLEEIINTQSESLKSSENKMKDLLLKLSTLETENKDNTEKLQAEILKRADKIEILQKEGEKDKQHVDSLENQVSQLQNILQEKEQLILQYKDRVKQLEVQNIENQALLDAAESKITETKKQYDLMLETKQLELSRHLKEISQRNDQAINDIRKKYEVEKLEIINLEKEKMDEVVREMERKCDQKLAECKEESRLYLMHIQEEHTNLITRIQQEHDRKELSLKADHSEELKRVQLQAEDDLREKTILLRNEHEVQIKVLRHQHEDECKKLQEELDRQKSREDRQRALLQLQWKVMSDKTQEDPEVNSKKDYSISSIKMRDSSNRKRSQCALVRVENREKDSPFPGATQTPVSNLLKKVENVNPGSAISVPKHSKKVTHHEYEVETTNGRTITKRRKTKSTVMFGDPRKHKKANTPKAHTPRTIVKEIKGDRHLHPSNIGELFSEGSLNPYADDPYAFD* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0444 876 MobiDBLite consensus disorder prediction 715 745 - -
Vvi18g0444 876 Coils Coil 157 201 - -
Vvi18g0444 876 MobiDBLite consensus disorder prediction 847 876 - -
Vvi18g0444 876 Coils Coil 641 661 - -
Vvi18g0444 876 SUPERFAMILY Tropomyosin 47 291 - -
Vvi18g0444 876 Coils Coil 567 613 - -
Vvi18g0444 876 Coils Coil 358 378 - -
Vvi18g0444 876 Coils Coil 390 410 - -
Vvi18g0444 876 Coils Coil 66 100 - -
Vvi18g0444 876 Coils Coil 122 149 - -
Vvi18g0444 876 Coils Coil 418 459 - -
Vvi18g0444 876 Coils Coil 471 547 - -
Vvi18g0444 876 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 32 801 - -
Vvi18g0444 876 Coils Coil 245 265 - -
Vvi18g0444 876 Coils Coil 678 705 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0444 - - vri:117906776 1651.34