Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0442 ATGGGTTTGCAAGAATCCGAAAGCCTCACATGTAAAGTGAATGTGACCCTTCCCTACACTACTCCGGTCGTCGGCCTCAAGTTCAAACCCGCGGTTCGAGTTTTGGGCATAACCTCCCTTCCAGCTCCCCAGCATAACAAAAAATTCAGTTGGTACCGGGAAAAGATTACTTGTTCTGTGCACCATCTTCAGCTTGCTACCATCCAGTGTATGTCTTGTGTGGCATTAGATATGCCTGTCAGAGAAAGTTACTATTGCTCTAAGCAGTGCTTCTTAGATTTATGGCCGCAACACAAGGCACGTCATTGTCTTGCTGCTGAAAGTGTCAGTAAGGCTTCAAATGATTGTTACAGTTTGATGGGAAGGCTGAGAAGTAGTGGCTCTTGGACTGACTTTGGAATTGACTCAATATTTGTTGAGAGTGAAACACTGGTGGAACGAGAAGGGAAAACATGGATTAAGGTGGGCTCATCAGAAACTTATGTGCCCTCAATGGATGATTTTGGCTTCTGTTTGATGTTTGAATCTTTAGCAATAGATTGTTCACTTGGATTTCCCTTGTCTGAAATAAAGAGCATCATGACTGATCCGGTAATCATTCCTCCCCACCCTTGCCCTCGTCATATGATCCAAATTCAACACCTGAAGGAACCTAGGAACATCGTTTTTGAGTCTCAATCTTCTAATGCTGATACTTTTAGTGTGCTATCCTATAACATCCTTTCCGACATTTATGCTAGTAGGAGTGCACACGTAAAATGTCCTGGATGGGCTCTTGCATGGGAGTATCGTCGGAAAAATTTGCTCCTTGAGATTACTGGATATGATGCAGATATCATCTGTCTCCAGGAGGTACAAAGTGATCATTTGGAGAATTACTTTAAACCCAAGCTAACAAAACGTGGCTACTCAGTTACTTACAAGAAAAAAGCCTTGCAGGTGTACACAGCTAATCAATTTATAAGTGATGGGTGTGCTACATTTTTCCGACACGACCGATTCAAAGAAATAACAAAATATGAGCTTGAGTTTGATAAAACAGCATTGTCAGTGGTTGAAGGATTGGAACCAGGCCAAAGGACTGAGGGCCAAATTCGTTTGATGAAGGGTAATATTGCACTTGTTATAATATTAGAAAGAGTGGAAAATGGCAGCTCTCTTGGTGCTTTTCAGCCTAGAATTTGTGTGGCAAACACTCATATATATGCCAACCCAAACCTTCCAGATGTAAAACTATGCCAGGTTGCAAGTCTTGTTAATGGACTAGAGAAAATTGCTCAATCACAAATTCCTATTTTAATTTGTGGGGATATGAACTCTCTTCCTGGAAGTGATCCTCATAAGTTTCTAGTCACTGGTAGAATTTGTCCTGTCAGTAGCAAGGAGACAGCTGATCCATTGGGTATATATAATCTTCTCAAGCTTCAACACTCGATTCCTCTGGTAAGTGCCTATTCATCTTTACTTTGTTCGGGGAGAGTGAAGGAAGATGAAAAGAAGAAGATGAACCAGGAGACAAAAGAGCCTGTATTCACCAATCTTTCTGGAGGAAACTCATCAACTTTGGATTATATTTTTCACACAGAGAATAATTTGGAGGTTGAAGGTCTTTTGGAGCTTCTCAACTCCGAAACTGTAGGTGAAGCTCTTCCATCACCTTTATGGTCATCTGATCATATTGCCCTCATGGCAAATTTCAGATTTAAGCAAGCTTTCTGCTGGGAGCCGCACTCACCACCTCCTCAAAATCCATGGCACCAAGCTGCGCCTCTGTCATAG 1779 0.4188 MGLQESESLTCKVNVTLPYTTPVVGLKFKPAVRVLGITSLPAPQHNKKFSWYREKITCSVHHLQLATIQCMSCVALDMPVRESYYCSKQCFLDLWPQHKARHCLAAESVSKASNDCYSLMGRLRSSGSWTDFGIDSIFVESETLVEREGKTWIKVGSSETYVPSMDDFGFCLMFESLAIDCSLGFPLSEIKSIMTDPVIIPPHPCPRHMIQIQHLKEPRNIVFESQSSNADTFSVLSYNILSDIYASRSAHVKCPGWALAWEYRRKNLLLEITGYDADIICLQEVQSDHLENYFKPKLTKRGYSVTYKKKALQVYTANQFISDGCATFFRHDRFKEITKYELEFDKTALSVVEGLEPGQRTEGQIRLMKGNIALVIILERVENGSSLGAFQPRICVANTHIYANPNLPDVKLCQVASLVNGLEKIAQSQIPILICGDMNSLPGSDPHKFLVTGRICPVSSKETADPLGIYNLLKLQHSIPLVSAYSSLLCSGRVKEDEKKKMNQETKEPVFTNLSGGNSSTLDYIFHTENNLEVEGLLELLNSETVGEALPSPLWSSDHIALMANFRFKQAFCWEPHSPPPQNPWHQAAPLS* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0442 592 FunFam Carbon catabolite repressor protein 4 1 199 573 - -
Vvi18g0442 592 SUPERFAMILY DNase I-like 225 570 IPR036691 -
Vvi18g0442 592 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 185 568 - -
Vvi18g0442 592 Pfam Endonuclease/Exonuclease/phosphatase family 236 559 IPR005135 GO:0003824
Vvi18g0442 592 Gene3D Endonuclease/exonuclease/phosphatase 199 573 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0442 Vvi-Chr18 4377875 4385610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0442 234 464 EF-hand Containing Proteins AT5G54130 26.033 7.47e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0442 K12603 - vvi:100267801 1200.65