Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0438 ATGGCGACTCTTTCCGTGACCGAAGATTGTGAGCAGCTCAGAAAAGCCTTCGCAGGATGGGGGACGAATGAAGGGTTGATCATATCCATATTGGCTCATAGAAATGCTGCTCAGATCAAGTCGATTCGGCAAACATATGCCCAAACTTATGGAGAAGATCTTCTCAAGGATTTGAACAAAGAACTTTCCAATGACTTCGAGAGGGTGGTATTGCTGTGGACACTTGATCCTGCTGAACGTGATGCCTTTTTGGCAAATGAAGCTACCAAGAGGTGGACTTCAAGCAATCAAGTTCTAGTGGAGATAGCTTGTACTAGGACTTCACAGCAACTACTCTTGGCGAAGCAAGCTTATCATGCTCGTTTTAAGAGATCCCTAGAAGAGGATGTTGCATATCACACAAGTGGGGACTTTCGCAAGCTTTTGGTACCTCTTGTGGGCACGTATCGATATGAGGGAGAGGAGGTGAACATGACTCTTGCAAAATCAGAGGCTAAGATACTCCATGAGAAGATTTCCGAGAAGGCTTACAATCATGAGGATGTCATCAGAATTTTGGCAACAAGGAGCAAAGCACAGATCAACGCAACACTGAATCACTACAAAAATGAATTTGGGAATGATATCAACAAGGATCTGAAAACTGACCCCAAGGACGAGTTCCTTGCAATATTGAGAGCCACTGTGAAGTGCTTGACCCGCCCAGAGAAGTACTTTGAGAAGGTTCTCAGGCTGGCAATCAACAAGCGAGGCACAGATGAAGGGGCTCTCACTAGAGTTGTCACTACAAGGGCTGAGATTGACATGAAGATCATAAAGGAGGAGTACCATAAAAGGAACAGCGTCACTCTGGATCATGCCATTGGCAAGGACACCACTGGAGACTATGAAAAAATGCTTCTGGCCCTGATAGGACACGGAGATGCTTGA 930 0.4548 MATLSVTEDCEQLRKAFAGWGTNEGLIISILAHRNAAQIKSIRQTYAQTYGEDLLKDLNKELSNDFERVVLLWTLDPAERDAFLANEATKRWTSSNQVLVEIACTRTSQQLLLAKQAYHARFKRSLEEDVAYHTSGDFRKLLVPLVGTYRYEGEEVNMTLAKSEAKILHEKISEKAYNHEDVIRILATRSKAQINATLNHYKNEFGNDINKDLKTDPKDEFLAILRATVKCLTRPEKYFEKVLRLAINKRGTDEGALTRVVTTRAEIDMKIIKEEYHKRNSVTLDHAIGKDTTGDYEKMLLALIGHGDA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0438 309 SMART annex3 93 145 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 SMART annex3 251 303 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 SMART annex3 176 224 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 SMART annex3 21 73 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 Gene3D Annexin 76 146 IPR037104 GO:0005509|GO:0005544
Vvi18g0438 309 ProSiteProfiles Annexin repeat profile. 234 305 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 PANTHER ANNEXIN 7 303 - -
Vvi18g0438 309 ProSiteProfiles Annexin repeat profile. 159 230 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 ProSiteProfiles Annexin repeat profile. 4 75 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 SUPERFAMILY Annexin 4 308 IPR037104 GO:0005509|GO:0005544
Vvi18g0438 309 FunFam Annexin 159 233 - -
Vvi18g0438 309 ProSitePatterns Annexin repeat signature. 251 303 IPR018252 GO:0005509|GO:0005544
Vvi18g0438 309 Gene3D Annexin 2 75 IPR037104 GO:0005509|GO:0005544
Vvi18g0438 309 Gene3D Annexin 158 233 IPR037104 GO:0005509|GO:0005544
Vvi18g0438 309 Gene3D Annexin 234 309 IPR037104 GO:0005509|GO:0005544
Vvi18g0438 309 FunFam Annexin 76 146 - -
Vvi18g0438 309 FunFam Annexin 234 306 - -
Vvi18g0438 309 Pfam Annexin 164 221 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 Pfam Annexin 81 145 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 Pfam Annexin 9 72 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 Pfam Annexin 239 303 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 PRINTS Annexin family signature 291 304 IPR001464 GO:0005509|GO:0005544
Vvi18g0438 309 PRINTS Annexin family signature 18 40 IPR001464 GO:0005509|GO:0005544
Vvi18g0438 309 PRINTS Annexin family signature 85 106 IPR001464 GO:0005509|GO:0005544
Vvi18g0438 309 PRINTS Annexin family signature 247 267 IPR001464 GO:0005509|GO:0005544
Vvi18g0438 309 PRINTS Annexin family signature 58 74 IPR001464 GO:0005509|GO:0005544
Vvi18g0438 309 ProSiteProfiles Annexin repeat profile. 76 147 IPR018502 GO:0005509|GO:0005544
Vvi18g0438 309 FunFam Annexin 1 75 - -
Vvi18g0438 309 PRINTS Plant annexin signature 112 126 IPR009118 -
Vvi18g0438 309 PRINTS Plant annexin signature 219 237 IPR009118 -
Vvi18g0438 309 PRINTS Plant annexin signature 154 174 IPR009118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0438 Vvi-Chr18 4338954 4341582 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0438 K17098 - vvi:100266093 611.683