Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0433 ATGGAGAGAGCAGACGAGTCTCTGCTTTCAGGGGTGTACAAGGAAGTGGGTGCAGCCCTCCATACGGACCCAACTGGCCTGGGCTCCCTCACCCTTTTCAGGTCCATGGTGCAGGCCTCTTCCTATCCACTCGCCGTTTACCTGGCCGCCCGTCACAACCGCACCCACGTCATTGCTCTCGGCGCCTTCCTTTGGGCTGCCGCCACCTTCCTCGTCGCCTTCTCCTCCACCTTCTTCCAGGTGGCAGTATCAAGAGCTTTGAATGGGATTGGCCTTGCAATAGTTGGACCTGCAATTCAGTCCCTTATAGCTGACTCCACTGATGATCACAACCGTGGTATGGCTTTTGGATGGCTACAGCTGACAGGGAACCTTGGCTCAATTCTTGGTGGACTCTGTGCATTGTTGCTGGCCCAGACAACATTCATGGGAATCGCGGGTTGGAGAATTTCCTTCCATCTTGTTGGACTGGTCAGTGTTATTGTAGGTATTTTAGTCCGCCTCTTTGCCAATGACCCACACTTCCCAGATGGTGCTGCTAAAGCCAGTAACCAAGTTCCAAGTAAATCCATATGGTCTGAAGTGAAGGACCTGGTTCAGGAAGCCAAATCTGTCATCAAGATTACATCCTTCCAGATCATTGTGGCTCAGGGTGTCACCGGTTCATTCCCCTGGTCAGCTTTGTCATTTGCACCCATGTGGTTAGAGCTTATAGGCTTCTCTCATAAGAAAACCGCATTCCTCATAAGCTTATTTGTTATTGCTGCTTCCCTTGGGGGACTGTTTGGGGGTAGGATGGGGGATATTCTTTCCAGGATCCGCCCAGATTCTGGGAGGATAATTTTGGCACAGATAAGCTCACTGTCAGCCATCCCACTAGCAGCACTACTTCTGCTGGTTTTACCTGACAATCCATCCACTGCAGCCATGCATGGTTTGGTCTTGTTCATCATGGGGTTGTGCATATCCTGGAATGCTCCAGCTACAAACAATCCAATTTTTGCAGAGATAGTCCCTGAAAAATCTCGAACAAGTATCTATGCTTTGGATCGATCTTTCGAGTCCATATTGTCATCTTTTGCTCCACCTGTTGTTGGGATATTGGCTCAGCATGTTTATGGTTACAAACCGGTTCCCGAGGGATCCAGTGAATCGGAAGAGATAGCAACAGATAGAGGGAATGCTGCATCATTGGCCAAGGCACTGTACACAGCTATAGGAATTCCAATGGCTCTCTGTTGCCTCATCTATTCATTCCTATATTCCACTTATCCCAGAGACAAGGAACGGGCTCAGATGGAGGCTTTAATAGAATCAGAGATGCAACAGATGGAGTCGGACAATATATGTGCAGGAACAGAATATCCTCGAGCTCAGCTACTAGAATCAGAAGATGCCTATGTCAATGATAGGGGCGTCACTGAAATAGATTATGAAGGGAGGAGCAGTCCAGATTTTGAAGAAAATGATGACAAGATGTTACTTCACCACCAATTGACATTCTCCAACTTAGGGGAATAG 1521 0.4819 MERADESLLSGVYKEVGAALHTDPTGLGSLTLFRSMVQASSYPLAVYLAARHNRTHVIALGAFLWAAATFLVAFSSTFFQVAVSRALNGIGLAIVGPAIQSLIADSTDDHNRGMAFGWLQLTGNLGSILGGLCALLLAQTTFMGIAGWRISFHLVGLVSVIVGILVRLFANDPHFPDGAAKASNQVPSKSIWSEVKDLVQEAKSVIKITSFQIIVAQGVTGSFPWSALSFAPMWLELIGFSHKKTAFLISLFVIAASLGGLFGGRMGDILSRIRPDSGRIILAQISSLSAIPLAALLLLVLPDNPSTAAMHGLVLFIMGLCISWNAPATNNPIFAEIVPEKSRTSIYALDRSFESILSSFAPPVVGILAQHVYGYKPVPEGSSESEEIATDRGNAASLAKALYTAIGIPMALCCLIYSFLYSTYPRDKERAQMEALIESEMQQMESDNICAGTEYPRAQLLESEDAYVNDRGVTEIDYEGRSSPDFEENDDKMLLHHQLTFSNLGE* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0433 506 Gene3D MFS general substrate transporter like domains 2 379 IPR036259 -
Vvi18g0433 506 SUPERFAMILY MFS general substrate transporter 3 430 IPR036259 -
Vvi18g0433 506 CDD MFS_spinster_like 1 417 IPR044770 -
Vvi18g0433 506 FunFam Major facilitator superfamily protein 1 380 - -
Vvi18g0433 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 425 IPR020846 GO:0022857
Vvi18g0433 506 Pfam Major Facilitator Superfamily 5 328 IPR011701 GO:0022857|GO:0055085
Vvi18g0433 506 PANTHER SPINSTER 1 444 IPR044770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0433 Vvi-Chr18 4306945 4309643 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0433 - - vvi:100255818 950.273