Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0432 ATGGATTCTGGCAACAGTAGTAGTATGCAATCTTCGAGTGGGGGGGATGAAGAGTATGAGTCAAGGCCCGAGTCGATCCCGGCTTTCTTGAATCCTTCTGGCCACTTTGGTTCAGTCTCATCAAACCCACAGCCACCACCTTTTCCTCACCACCAAAACCACCCACCTACTTTGTTTGATCCTCGATCAAATTATGTGGATGCTTTCTCTCAATCATCAGCAAACCCAAATGCAAATTCCTTGTTAAATCTCGACACGGTTTGGTCCAGAGGCCTAAGATCTGAGCCGAATTGCACTGACTTTGGGAACCTCACAGGCTTGTCTTCTTCCTCAACATCATCATCAGGCCAATCTATGTTAGGGGTTCAAGGACCCGGTCAGGGCCAATTCCCAAGTTCATCTTCCACGAGGATGATGTCAGTCCATGAAAATGGTGGACGTGCTTCGTCTGCTTCACTGCCCTCTGATCAAACCAACGTGGTCCGAAGCTCCAAGAAGCGAACCAGGGCTTCAAGACGGGCACCCACAACTGTACTCACCACCGACACGTCCAATTTCCGAGCAATGGTGCAAGAATTCACTGGGATCCCCGCTCCTCCATTCTCCGCCTCACCCTACTCTCGCAGGCTCGATCTCTTTGGCGCTGGCTCATCCATCAAGCCGGGACATCTGGAACCACTGGGGCCTCTCTATCCTTTACGCCCTTCCCCCCACAAGGTTCAGCCAAACCTATTTGTATCTTCATCTTCCTCCCCATCTCCTTCTTTCTTCAACTCTACTATCGGTGACTCTATTGTTTCTACTACTAATATTGCCACTACCTCTACTAACAACATCATTACCACTTCCATGGCTGCTGCCACCAACGCTATCAATTCAGGTTCTAATACCTACCAACTACCTTCTGATCCTGGGTTTCCCAAACAACCTCAAAATGTACTAGGCATGCAAAACCCAATCCTCTCTTTCCAGTCTCTCCTGCAGTCTCCACCTTCCCATCCGCTCAAGTACCCTTTAGCCGATGTACCGGTTTTTGGCACCAAGTCTCCGGCAAGTTTAACCTTACCCTTACCTTCCTTTGAGGAATTGGGCGTGCCCCATGGACACGTTAATGCAAACATTAGCGGGCTCCCAAGTCATGCAACTTCTGGTGGGTCGAGGCGGCTCAGGACAGACGATAATGGAACATGCTGGAGGGATGGAGCGGGATCCAACGAGGGGAGTCGAGAACAGTTGAGGCCGTTCAATGGAAATTATGGTGATTCACCCCAGGTTAGTAGCTTTAAGTTGAACTGCTCAGCTTCTTCATCAGCTTTCCACCCTGAGAAGGGATCAGATAACGTTTCCTCTAGGGGTGAAGGTACAGTGGATTCATGGATTTGTCCTTCGGATTAG 1395 0.4968 MDSGNSSSMQSSSGGDEEYESRPESIPAFLNPSGHFGSVSSNPQPPPFPHHQNHPPTLFDPRSNYVDAFSQSSANPNANSLLNLDTVWSRGLRSEPNCTDFGNLTGLSSSSTSSSGQSMLGVQGPGQGQFPSSSSTRMMSVHENGGRASSASLPSDQTNVVRSSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSASPYSRRLDLFGAGSSIKPGHLEPLGPLYPLRPSPHKVQPNLFVSSSSSPSPSFFNSTIGDSIVSTTNIATTSTNNIITTSMAAATNAINSGSNTYQLPSDPGFPKQPQNVLGMQNPILSFQSLLQSPPSHPLKYPLADVPVFGTKSPASLTLPLPSFEELGVPHGHVNANISGLPSHATSGGSRRLRTDDNGTCWRDGAGSNEGSREQLRPFNGNYGDSPQVSSFKLNCSASSSAFHPEKGSDNVSSRGEGTVDSWICPSD* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0432 464 MobiDBLite consensus disorder prediction 435 456 - -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 103 161 - -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 103 177 - -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 1 79 - -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 376 421 - -
Vvi18g0432 464 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 384 IPR039609 -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 1 16 - -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 435 464 - -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 64 79 - -
Vvi18g0432 464 MobiDBLite consensus disorder prediction 376 390 - -
Vvi18g0432 464 Pfam VQ motif 173 200 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0432 Vvi-Chr18 4299208 4300602 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0432 - - vvi:104882483 844.343