Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0427 ATGCATCAGATGAGCGAAGACAGCTTCGATCGATTACCAGACCCGCTTATCCTAGTCATCTTCAACTCAGTTGCAGACATCAAAACCCTAATTCGGTGCCGCGCCGTCTCCAAGCGTTTCAACTCGTTGGTTCCTCAGGCAGAGACTCTGGTCTTGAAGGTGGATCGTGTCATCTCCACTGACTCAGATGGTTCCTTTTTCCTCAGCTTCCTTAAATCCATCTTCAGATCGCTGCATCATATCATATCCCCAAAATCACTACCAATCCAGCCTCGGCCGCACAACTCCCCGACCCAAATCCTGCGGGGGTTCGACAGGATTAGGAACCTGGAGATTGAGTTACCAGGGGGCGACCTGTGTTTGGAGAAGGGGGCGGTTCTGAAATGGAAGGCGGAGTTCGGAAAGAGGCTGAAGAGCTGCGTCATCATGGGGTACCGCGGGCTGGGAGAGGGGGAAGAGTTGGATTTTGGGGGAGATATGGATGGAGGGTTGAAGGTGAGAGTGGTGTGGACGATAAGTGCGCTGATAGCGGCGTCGGCAAGGCACTACTTGCTGAGGGAGTTGATAAGGGAGCACAGAGAGCTGGAGAGGTTGGTATTGAGGGATAGGGATGGAGAAGGCACGGTGGTGATGGATAGGGAGGCGTTGAGAGAGGATAAGAGTAGAACAAAGGTGCCAGCAGTGCAGATGAGGATGAGACACGAACCGTTGCTGGAGCTCGAGGGGTGTGGAGTTAGGATGGGGGGGGCCACCCTGGTGGTAGTGACACCGATTAAGGATGGGAGGAAGACGGGGACGGAGGAGGCTGGGTTAGTTTGTGATGCGTTTGAAGGGATGTTCGGAGAAGCCGCTAGGACTCTGCTCAAGACTCGGACTTACCTCCTCGAGATGAACTCCTTCTAA 903 0.5393 MHQMSEDSFDRLPDPLILVIFNSVADIKTLIRCRAVSKRFNSLVPQAETLVLKVDRVISTDSDGSFFLSFLKSIFRSLHHIISPKSLPIQPRPHNSPTQILRGFDRIRNLEIELPGGDLCLEKGAVLKWKAEFGKRLKSCVIMGYRGLGEGEELDFGGDMDGGLKVRVVWTISALIAASARHYLLRELIREHRELERLVLRDRDGEGTVVMDREALREDKSRTKVPAVQMRMRHEPLLELEGCGVRMGGATLVVVTPIKDGRKTGTEEAGLVCDAFEGMFGEAARTLLKTRTYLLEMNSF* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0427 300 SUPERFAMILY F-box domain 3 52 IPR036047 GO:0005515
Vvi18g0427 300 CDD F-box_SF 10 44 - -
Vvi18g0427 300 PANTHER OS05G0510400 PROTEIN-RELATED 4 294 IPR044809 -
Vvi18g0427 300 Gene3D - 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0427 Vvi-Chr18 4268339 4269301 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0427 - - vvi:100254118 528.094