Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0426 ATGGAGATTGGCAACAGCAGGAGCCTAGGCTTCAGGGTTGAAATGTTTTTGGGTCCTGAAGATGATGAAGTGGACCCAACCCTGGGCCCCCTATCCAACTCCCAGGAAAGAACATCCAAAGGATTGAGGCCAGCATACGAAGTGGAAATCTTGTATGGAAGCCCAGCCCAAATAACTAGCTTGGGGATTGGGGGTTTGGGGCATTGGGGCCTTGAGGGAGAGCTGTCTGTGACCCTGTTTTTCTCAACCTCCCATTGTGAGGTGTGGCACCAGCTCATCCCATTCCCATGCAATCCATCTCAATCCTCCAAAGTCGATACCCTCCTCCCTCCCCTCAGTACCGCTCCTCATCTCTCCATGGAGGAGCGGGTTCCACCAGTTACCAATGCCAATGGAAATACTGACCTCTTCCCCGATTCCCAAAACATCTTCCGGTCGGGCACTTATGTTGTCCAAGTCCCCAAAGATCAAATCTACCGCGTTCCACCGCCTGAAAATGCTTTGATTGCAGAACGCCATCGTTCCCCTGCTCAGAAGAAAAAGTCCTATCGTTCTCGCTGTTTCATTCTCTGCATCCTCATTTGCATCATTGCCGTTATTGTTGCCATAGCAGCCGCCGTTTCCTCTCGAGTTCTTCATCCTAAGAGTCCCATATTCCACATTCAGCATCTCGTGGTTACCAAGTCCTCCCATTCCCGTCCACAATATAAAATCACGTTAAAAGCAAAAAATCCCAATTCCCATACTGGCATCACCTACGAGGCTGGTGGTCATGCTTCTCTCTCTTTCAAAAACCATGAAATAGCAGATGGAGATTGTCCGACTTTCTCCCAAGGCCAGAAGGACTCCACAGTCTTTGTTGTACCACTAAGTGGCTCGAAGAGTGCATTGCCTAAAGAGATTGAGAGGAGCATCAAAAGCCAAAATTCAACAGCACACACCTCTCTTTCTCTGTCTCTGTCAATGGATTATCCTATCAAACGAAGAGTTTGGTTGTTCAAAAGGGGTAAGCGACTTGCTGTTTTATGCAATGTAACAGTGGATACGTTGGCAAAGGGTACCCGTGTCCTATCCCAGGAATGTCATAGCTAA 1092 0.4835 MEIGNSRSLGFRVEMFLGPEDDEVDPTLGPLSNSQERTSKGLRPAYEVEILYGSPAQITSLGIGGLGHWGLEGELSVTLFFSTSHCEVWHQLIPFPCNPSQSSKVDTLLPPLSTAPHLSMEERVPPVTNANGNTDLFPDSQNIFRSGTYVVQVPKDQIYRVPPPENALIAERHRSPAQKKKSYRSRCFILCILICIIAVIVAIAAAVSSRVLHPKSPIFHIQHLVVTKSSHSRPQYKITLKAKNPNSHTGITYEAGGHASLSFKNHEIADGDCPTFSQGQKDSTVFVVPLSGSKSALPKEIERSIKSQNSTAHTSLSLSLSMDYPIKRRVWLFKRGKRLAVLCNVTVDTLAKGTRVLSQECHS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0426 363 SUPERFAMILY LEA14-like 200 325 - -
Vvi18g0426 363 Pfam Late embryogenesis abundant protein 239 336 IPR004864 -
Vvi18g0426 363 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 131 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0426 Vvi-Chr18 4265173 4266355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0426 147 363 EF-hand Containing Proteins AT5G21130 33.190 2.54e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0426 - - vvi:104882481 454.136