Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0418 ATGGGTTCTCGAGGAAGACCACTATTTGATCTTAATGAACCCCCTGCAGAAGATGAAGAAGAGAATGATGGTGTCTTTAGCTTCCAGCCTCAGAAGGCACTTCCTTCCTTAAATTCCCATACTCCTGACTTGTTTTCTACATCATCAGGTCCTCAACGAATCCTAAATAACCATGCTTTTACACATGCATCTTCCGTTTCGGGCTTTCAGCCTTTTGTTCGGCCTAAAGGAGCTAATGTCTCTGAAGAGCCTGTTGAACAAAAGAGGGCTGGGAATCAGAATTCAAAGTTTGCCTCATCATCTAATGCCGGTAATGGCGATGAAACAAATGCAGGACTGCAGCTAGTTTCGAGTCCTGCAGATGCTCAAGCTGTTGAAAGAGAAGAAGGGGAATGGTCTGATGATGAAAGCTCAGCTAATGTATATGGAAGCAGTAGTATGCAAGAGCAGTCAGTTAGTGGATCTGGTAAAGCTCAAGCAATGTCTGAGCAGATGGATTACCATGCTTCTAGTGTGGCTGCAGAGACACTTTCTTGTGATATAAAAGTTTTTGAAAGTACCAAGGAGGAAAATAATAGTCATGCCTCTGTAACGTTGGATCCAGACACACATGATCAGAGAAGTAACAGTAGCAGAAATTCAGAAGGCAATGGTAAAGGTGATGTGGGTCCCATGGATGGTCAGGAAGAACCTGGTTTAGTACCAAAACTGAAAGAAGTTAAGGGAGTTGAAGCAAGCTTTGCTGTGAAATGTGCAAATAATCCTGGAAAAAAGCATAAGCTTGACCAACACAAAGAAGCGATGCTTGGGAAAAAAAGAACCAGGCAGACTGTGTTTCTTAATTTGGAAGATGTCAAGCAAGCTGGCCCTATGAAAACTTCCACTCCAAGAAGACAAAACTTTCCAGCACCTATTACAACACGAATTGTTAAAGAAATTCGTTCTGTTCCTCCACCTGCTGAACGCATTGGAGAAAAGCAGAATCATTCCATGATTAAAGATCAGAAACAAGTGGATTTATCATCTAATGAAGGAGGAGGAGGAAATCTTGTAGAATCTAATGAACCTAAATCTGAAAGTAACAATGATATGAATTCTGGACTTCTAGGTAGACCTAGGAGGCTAAATAGTGCTAATGATATTTCTGCAGAGGTGCACCCACCAACAATTCCAAGACAGAGTTCATGGAAGCCCACAGATTCAAGGCAATTTAAGAATTCACAGTTTTCTGGCAGGAAGCCATCTATGATCAATCAAAGTGAATCAAAATTGGTAAACAAAAAACATCCTCCTGCCAAAATGCAAACTACAGTGAGCTCACAATATCAAGATACTTCAGTGGAACGCCTTATACGGGAGGTGACAAATGAAAAGTTTTGGCATCACCCAGAGGAGACTGAGCTCCAATGTGTTCCTGGTCGGTTTGAATCTGTAGAAGAATATATTAGAGTGTTTGAGCCTTTGCTTTTTGAGGAATGCCGAGCACAACTCTATAGCACCTGGGAGGAGTTAACTGAAACAGTTTCAAGAGATCTACATGCAATGGTCCGGATAAAAAGCATTGAAAGGCGAGAAAGAGGATGGTATGATGTGATAGTCCTTCCAGCAAATGAATGCAAGTGGACATTTAAAGAGGGTGATGTTGCAATTCTTTCGGCTCCCAGGCCTGGATCAGTTAGATCCAAGAGGAATAACACATCTTCAATTGAAGATGATGAAGAGGCGGAGATCAGTGGACGTGTGGCTGGTACTGTCAGACGACACAATCCAATTGACACTCGTGATCCTGTGGGTGCAATCCTCCATTTTTATGTTGGGGATTCATATGATCCTAACAGCAAGGTTGATGATCATATTCTAAGGAAACTTCATCCCAAGGGTATCTGGTATTTAACAGTGCTTGGTTCTCTTGCAACCACCCAGCGGGAGTACATTGCTCTTCATGCATTTCGTCGTCTCAATTTACAGATGCAAACTGCTATCCTTCATCCAAGTCCAGAACACTTCCCAAAATATGAAGAGCAGCCCCCTGCCATGCCTGAATGCTTCACACCGAACTTTGTTGAATATTTACACAAAACCTTCAATGGTCCCCAGCTAGCAGCAATTCAATGGGCTGCCATGCATACGGCTGCTGGCACAAGTAGTGGGGTGACAAAGAGGCAAGACCCATGGCCATTTACTCTAGTTCAAGGGCCTCCAGGGACAGGCAAGACACACACAGTCTGGGGAATGCTAAATGTCATCCATCTTGTTCAGTATCAGCACTACTACACTGCTCTGCTTAAGAAAGTAGCACCTGAAAGTTATAAGCAAACTAATGAGAGCACTTCTGACAATGTCTCTATGGGATCCATTGATGAAGTTCTCCAGAGCATGGATCAAAACCTCTTCCGCACTCTTCCAAAACTTTGCCCAAAACCTAGAATGCTTGTTTGTGCTCCCTCTAATGCTGCAACTGATGAGCTGCTGGCACGTGTTCTTGATCGTGGATTTATTGATGGTGAGATGAAAGTTTATCGTCCTGATGTGGCCCGAGTTGGAGTTGATTCACAAACACGGGCTGCTCAGGCAGTTTCTGTTGAGCGTAGAACTGAGCAGCTTTTGGTTAAGAACCGTGATGAAATTCTTGGATGGATGCACCAGTTAAAAGTTCGTGATGCACAGTTGTTTCAGCAGATGCTTTGTCTTCAAAGAGAGCTCAATGCTGCAGCAGCTGCTGTTCGTTCGCAGGGGTCTGTTGGAGTTGACCCTGATGTTCTTGTGGCTCGAGACCAAAACCGAGACACATTGCTTCAAAACCTTGCAGCAGTGGTTGAAAGCAGGGATAAGATTCTGGTTGAAATGAACCGCCTGGTCATTTTAGAAAGCAGGTTCCGTTCTGGAAGCAATTTCAATTTGGAAGAAGCCCGTGCAAATCTTGAAGCAAGTTTTGCCAATGAGGCTGAGATTGTTTTCACTACTGTCTCAAGTAGCGGCCGTAAATTGTTTTCTAGGCTTACTCATGGCTTTGATATGGTTGTTATTGATGAGGCCGCCCAAGCCAGTGAAGTAGCAGTTCTACCTCCCCTTTCTCTTGGTGCAGCACGTTGTGTTCTTGTTGGGGATCCTCAGCAGCTGCCTGCAACAGTAATCAGCAAAGCCGCTGGAACATTGTTATACAGTAGAAGCCTCTTTGAAAGGTTCCAGCAAGCAGGCTGCCCGACAATGTTGTTATCTGTGCAGTACAGGATGCACCCTCATATTCGGGATTTCCCATCAAGGTACTTTTACCAAGGACGTCTTACTGACAGTGAAAGTGTTACTAATTTACCTGATGAGGCATACTACAAGGATCCTTTACTTAGACCTTATGTGTTCTATGATATTACACATGGACGGGAGTCACACAGAGGTGGATCTGTCTCCTATCAGAACATACATGAAGCACAAATATGTCTCCGTTTGTATGAGCATCTCCAGAAAACTTTGAAGTCTTTGGGTATGGGAAAAATTTCTGTTGGCATAATCACACCATACAAGCTGCAGCTGAAATGCCTACAACGGGAATTTGATGATGTTTTAAGTTCTGAAGAAGGGAAGGATTTGTATATCAATACTGTTGATGCTTTCCAAGGGCAGGAACGTGATGTCATTATTATGTCCTGTGTCCGTGCCTCTAGTCACGGGGTGGGCTTTGTAGCTGATATACGCCGAATGAATGTTGCTCTCACTCGTGCAAGAAGGGCACTATGGGTTATGGGGAATGCTAATGCGCTGATGCAGTCTGATGACTGGGCAGCATTGATTTCTGATGCCAGAGCCAGGAGTTGCTATTTGGATATGGACTCTCTTCCCAAGGAGTTTCTTGTACCAAAGGGACCTACTTATGGCCCATTATCAGTCAGGAACTCCGTCAGAAGATGA 3906 0.4386 MGSRGRPLFDLNEPPAEDEEENDGVFSFQPQKALPSLNSHTPDLFSTSSGPQRILNNHAFTHASSVSGFQPFVRPKGANVSEEPVEQKRAGNQNSKFASSSNAGNGDETNAGLQLVSSPADAQAVEREEGEWSDDESSANVYGSSSMQEQSVSGSGKAQAMSEQMDYHASSVAAETLSCDIKVFESTKEENNSHASVTLDPDTHDQRSNSSRNSEGNGKGDVGPMDGQEEPGLVPKLKEVKGVEASFAVKCANNPGKKHKLDQHKEAMLGKKRTRQTVFLNLEDVKQAGPMKTSTPRRQNFPAPITTRIVKEIRSVPPPAERIGEKQNHSMIKDQKQVDLSSNEGGGGNLVESNEPKSESNNDMNSGLLGRPRRLNSANDISAEVHPPTIPRQSSWKPTDSRQFKNSQFSGRKPSMINQSESKLVNKKHPPAKMQTTVSSQYQDTSVERLIREVTNEKFWHHPEETELQCVPGRFESVEEYIRVFEPLLFEECRAQLYSTWEELTETVSRDLHAMVRIKSIERRERGWYDVIVLPANECKWTFKEGDVAILSAPRPGSVRSKRNNTSSIEDDEEAEISGRVAGTVRRHNPIDTRDPVGAILHFYVGDSYDPNSKVDDHILRKLHPKGIWYLTVLGSLATTQREYIALHAFRRLNLQMQTAILHPSPEHFPKYEEQPPAMPECFTPNFVEYLHKTFNGPQLAAIQWAAMHTAAGTSSGVTKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTALLKKVAPESYKQTNESTSDNVSMGSIDEVLQSMDQNLFRTLPKLCPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLVKNRDEILGWMHQLKVRDAQLFQQMLCLQRELNAAAAAVRSQGSVGVDPDVLVARDQNRDTLLQNLAAVVESRDKILVEMNRLVILESRFRSGSNFNLEEARANLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDPLLRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARARSCYLDMDSLPKEFLVPKGPTYGPLSVRNSVRR* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0418 1301 CDD DEXXQc_SETX 695 1077 - -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 334 367 - -
Vvi18g0418 1301 FunFam P-loop containing nucleoside triphosphate hydrolase 1076 1282 - -
Vvi18g0418 1301 Pfam AAA domain 1054 1250 IPR041679 -
Vvi18g0418 1301 PANTHER DNA2/NAM7 HELICASE FAMILY 258 1274 IPR045055 -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 86 117 - -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 190 217 - -
Vvi18g0418 1301 Pfam AAA domain 700 1047 IPR041677 GO:0004386
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 64 167 - -
Vvi18g0418 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 725 1277 IPR027417 -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 555 577 - -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 187 232 - -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 137 167 - -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 388 425 - -
Vvi18g0418 1301 Gene3D - 1076 1281 IPR027417 -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 314 441 - -
Vvi18g0418 1301 MobiDBLite consensus disorder prediction 1 25 - -
Vvi18g0418 1301 CDD SF1_C_Upf1 1078 1267 IPR047187 -
Vvi18g0418 1301 Gene3D - 632 1075 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0418 Vvi-Chr18 4161030 4167398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0418 - K10706 vvi:100255680 2562.33