Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0414 ATGGGGAGACTAATGCTCTTGGTAGCGCTCTGTGTGCTCCCGGCGCTAGTTAGCGCGGGCCGCCCGGTTTCGCAGCCGTTCGTGCTACAAGGTCGGGTCTACTGCGACACCTGCCGTGCCGGTTTCGAGACCTCCGCCACCACCTACATTGCCGGTGCCAAGGTCAGAGTGGAATGCAAGGACAGGAACTCAATGCAACTACTATACAGCATTGAGGGGATAACAGACTCAACAGGAACTTACAAGATCATGGTCACAGAAGACCGTGAGGATCAGCTTTGTGATGCTGTGCTTGTTAGCAGCCCCCAGAGTGATTGTGCATCAGTTGACCCAGGACGTGACCGTGCTGCTGTGATCCTCACCCGTTACAATGGGATTGTGTCAGACAACCGCTACGCCAATTCAATGGGCTTCTTGAAGGATCACCCAATGTCTGAGTGCACCCAACTTCTCCAGCAATACCAGGAATTTGAAGATTAG 480 0.5354 MGRLMLLVALCVLPALVSAGRPVSQPFVLQGRVYCDTCRAGFETSATTYIAGAKVRVECKDRNSMQLLYSIEGITDSTGTYKIMVTEDREDQLCDAVLVSSPQSDCASVDPGRDRAAVILTRYNGIVSDNRYANSMGFLKDHPMSECTQLLQQYQEFED* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0414 159 Pfam Pollen protein Ole e 1 like 30 109 - -
Vvi18g0414 159 ProSitePatterns Pollen proteins Ole e I family signature. 30 39 IPR006040 GO:0005615
Vvi18g0414 159 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 5 155 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0414 Vvi-Chr18 4138158 4140546 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0414 - - vvi:100854472 313.153