Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0412 ATGAACGGTCCGGATTGGCTCCTTGCTTTCTGGCCCTGCGTTTATCTTCCCCTCTCCACTCCTTCTCCTTTACTTCTCTCCCACAGCGTTCTCTCTCTAGACTTTGAGGTGGTGAAGAGACGAGGAGTAAGAGGAGCAGCAGCAGAAGAGAAGATGTTGTTGGGAAAGAGGCCACGTCCTCCGATGAAGAGAACAACAAGCATGACTGAGTTCACTCTTGATCCGAACAGCGTTCAACAACCACCTTCTGATTCACAAAACCCCTTCAAGGATCGCCCCAAATCAGTTGGATTTGGAGGTGACCCGTATAGACAGCCCAGTGGCGTTGATGGATATGGATTCGATCATCGCTTCTTGTCCGCGGTCTCACCCAGGAATCCTAGGCGTTACTCCGCTGATTTCGTCGACAACTCTCACTTCTTGAGAGCATGCTGCCTCTGCAAGCGCCGCTTGGTCTCTGGCCGTGACATCTACATGTATAGGGGTGATAGCGCTTTCTGCAGTCTAGAGTGCAGGCAACAACAAATGAACCAGGACGAAAGAAAAGAGAAGTGCTCATTAGCTTCAAAGAAGGAAGCCACAGCATCCACCGCCGGATCCGAAGGCGAGACGGTGGCCGCCATTTAA 627 0.5152 MNGPDWLLAFWPCVYLPLSTPSPLLLSHSVLSLDFEVVKRRGVRGAAAEEKMLLGKRPRPPMKRTTSMTEFTLDPNSVQQPPSDSQNPFKDRPKSVGFGGDPYRQPSGVDGYGFDHRFLSAVSPRNPRRYSADFVDNSHFLRACCLCKRRLVSGRDIYMYRGDSAFCSLECRQQQMNQDERKEKCSLASKKEATASTAGSEGETVAAI* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0412 208 ProSiteProfiles Zinc finger FLZ-type profile. 139 183 IPR007650 -
Vvi18g0412 208 PANTHER FCS-LIKE ZINC FINGER 5 52 199 - -
Vvi18g0412 208 MobiDBLite consensus disorder prediction 187 208 - -
Vvi18g0412 208 MobiDBLite consensus disorder prediction 57 109 - -
Vvi18g0412 208 MobiDBLite consensus disorder prediction 65 90 - -
Vvi18g0412 208 Pfam zinc-finger of the FCS-type, C2-C2 135 182 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0412 Vvi-Chr18 4122293 4123281 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0412 - - vvi:100252409 410.994