Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0411 ATGGAAGGCATTTTCAGATACTATAATTTAAATAATTCACTTCTATTTTACACTTTATCACCTCAGAAAGCATCTGCTAGCAGTGCAGCAATGGTTTCAGATTATGTCGGTTATCTTGAAAAGGGGCAAATCCCTCCCAAGCATATATCTCTTGTCAACTCTCAAGTTTCTTTGAACATCGAAGGAAGCAAGTACACAATTGACATGGTAAGGGGAGGACCAGGAAGCTATAGACTCAGGATGAATGAGTCGGAGATAGAATCAGAGATACACACATTACGTGATGGTGGTTTATTGATGCAGTTGGATGGAAACAGTCATATTATCTATGCCGAGGAAGAAGCAGCTGGAACTCGCCTTCTCATTGGTGGAAGGACTTGCTTGCTTCAGAATGATCATGATCCATCTAAGTTAGTCGCAGAGACACCATGCAAGCTGCTACGGTACTTAATCTCGGATAATAGTCATGTTGATGCTGACACACCGTATGCAGAGGTTGAGGTTATGAAGATGTGTATGCCACTTCTTTCGCCTGCTTCTGGAATTATTCAATTTAAGATGTCTGAAGGTCAAGCAATGCAGGCTGGTGAGCTTATAGCAAGACTTGATCTAGATGATCCTTCTGCTGTAAGGAAAGCAGAGCCTTTCCATGGGAGCTTTCCAATTTTAGGGCCTCCCACTGTTATTTCTGGGAAAGTTCATCAGAGATGTGCGGCAAGCATAAATGCAGCTCGGATGATCCTTGCAGGCTACGATCACAATATTGATGAAGTGGTGCAAAACTTGTTGAGTTGTCTTGATAGTCCTGAACTCCCTTTCCTTCAGTGGCAAGAGTGCTTGGCTGTTTTGGCAACCCGCCTTCCCAAAGATCTCCGAAATGAATTGGAATCAAAATATAAGGAGTTTGAAGGGATATCGAGCTCCCAGAATGTTGAGTTCCCTGCCAAATTGTTGCGGGGTGTTCTTGATGCGCATCTATGCTCCTGTCCTGATAAAGAAAAAGGAGCCCAAGAAAGACTTGTTGAGCCTTTGATGAGTCTTGTGAAGTCCTATGAAGGTGGAAGAGAGAGTCATGCCCGCATTATTGTCCAGTCTCTCTTTGAAGAGTACCTATCTATTGAAGAACTATTTAGCGATAACATCCAGGCAGATGTAATTGAACGCCTTCGACTTCAATATAAGAAAGATCTTCTGAAGATTGTGGACATTGTGCTTTCTCATCAGGGTGTCAGGAGTAAAAATAAGCTGATATTACGTCTCATGGAACAATTGGTTTACCCTAACCCTGCTGCATATAGAGATAAACTAATTCGCTTCTCTGCACTTAACCATACAAGCTATTCTGAGTTGGCACTAAAGGCAAGTCAACTACTGGAACAAACCAAACTGAGTGAACTTCGTTCCAGCATTGCAAGAAGCCTTTCTGAATTAGAGATGTTTACTGAAGAGGGTGAGAATATGGATACACCAAGGAGGAAAAGTGCCATCAATGAACGAATGGAGGCTCTTGTGAGTGCTCCTCTAGCAGTTGAAGATGCCCTTGTAGGTTTGTTTGATCACAGTGATCACACCCTTCAAAGGCGTGTTGTGGAGACTTACGTCCGCCGACTATACCAGCCCTACCTCGTAAAAGGGAGTGTTAGGATGCAATGGCACCGATCTGGTTTGATTGCTTCCTGGGAATTCTTGGAAGAGCATCTTGAGAGAAAGAATGCATCAGAAGATCAAATTTCTGACAAATCATTAATCGAGAAACATAATGAGAAGAAATGGGGGGCCATGGTTATAATCAAGTCTCTTCAGTTTTTGCCTACTGTAATTAGTGCTGCATTGAGGGAAACAACTCATCACTTTGAAGAATCAATTCCAAGTGGATCTATAGAACAAGATAGCCATGGTAACATGATGCATATTGCATTGGTGGGCATCAACAACCAGATGAGTTTGCTTCAGGATAGTGGTGATGAGGATCAGGCTCAAGAGAGAATAAACAAGTTAGCCAGGATACTTAAGGAGCAAGAAGTAAGCTCCAGTCTCCGTGCTGCAGGTGTTGGAGTAATTAGCTGTATCATACAGAGGGATGAAGGGCGAGCTCCCATGAGGCACTCCTTTCATTGGTCAGTGGAGAAGCTTTATTATGAGGAAGAGCCTCTTCTGCGTCACCTGGAACCACCTCTATCCATTTACCTTGAATTGGACAAGCTGAAAGGCTATGAGAATATAAAGTATACTCCATCAAGGGACCGTCAGTGGCACCTATACACTGTTGTAGACAAGCAATTACCAATCCAGAGGATGTTTCTCAGAACACTTGTAAGGCAACCCACAAGCGAAGGATTAACTTTGTACCAGGGGCTGGATGTGGGAACAACCCAAACCCAATCGACTATGTCTTTTACTTCTAAGAGCATTTTAAGATCCTTAATGACTGCAATGGAGGAATTGGAACTTCATGGACACAATGCTACTGTCAAATCTGACCATTCCCACATGTACCTTTACATTTTACAGGAGCAACAAATAGATGATCTTGTGCCATACCCTAAGAGAGTTGTCATAGGTGCTGGGCAGGAAGAAGCTGGAGTTGAAAGGATCCTGGAAGAGCTGGCACATGAAATTCATGCATCTGTTGGTGTAAGAATGCATCGGTTAGGTGTCTGTGAGTGGGAAGTGAAGCTTTGTATAGCATCTGCTGGACAGGCCTATGGTTCTTGGAGAGTGGTTGTTGCAAATGTGACTGGTCACACCTGCACTGTGCATATATACCGAGAATTGGAAGATGCCAGCAAACACAGAGTGGTCTACCATTCAAAATCTGCCCAAGGTCATTTGCAAGGTGTACCAGTAAATGCACACTATCAGCACTTGGGAGTACTTGATCGGAAGCGTCTGTTGGCCAGGAGAAGCAACACTACGTACTGCTACGATTTCCCACTGGCATTTGAGACAGCCTTGCAACAGTTATGGGCATCCCAGTCCCAGGGCATTAACAGACCCAATGATAAAGTTCTTTTCAAAGTCACAGAGCTTGCATTTGCTGACAAAAGAGGTAGCTGGGGTACTCATCTGGTTCCGGTGGAGCGCACACCTGGAGAAAATGATGTTGGAATGGTAGCCTGGCGTATGGAAATGTCTACTCCCGAGTTCCCAAATGGAAGGACAATTTTGATAGTAGCAAATGACGTAACCTTCAAAGCTGGGTCTTTTGGCCCAAGAGAGGATGCATTCTTCCTTGCAGTGACTGATCTTGCTTGCTCTGAGAAACTGCCCCTAATTTATTTGGCAGCAAACTCTGGAGCTCGTATTGGTGTAGCTGAGGAAGTGAAAGCCTGCTTTAAGATTGGTTGGTCTGATGAATCAAGTCCTGAGCGTGGTTTCCAGTATGTATATTTGACTCCTGAGGACTATGCACGCATTGGGTCATCTGTGATAGCTCACGAGTTAAGTATGGAAAGTGGAGAAACCAGATGGGTTATAGATACCATAGTCGGGAAGGAGGATGGTTTGGGGGTTGAGAACTTAACGGGTAGTGGAGCCATTGCTGGTGCATATTCAAGAGCATATAAGGAAACCTTTACTTTAACTTATGTGACAGGCAGGACTGTTGGAATAGGCGCTTATCTTGCTCGGCTCGGGATGCGGTGCATACAGAGGCTCGATCAGCCTATAATTTTGACTGGTTTCTCTGCATTAAACAAACTTCTTGGTCGGGAGGTGTATAGTTCCCACATGCAACTTGGTGGACCTAAGATTATGGCAACCAATGGAGTAGTTCACCTGACAGTTTCAGATGATCTAGAAGGGGTATCAGCTATTTTAAAGTGGCTGAGCTATGTTCCTTCCCATGTAGGTGGCGCACTTCCTATTTTGAAACCTTCGGATCCTCCAGAAAGACCTGTTGAGTATTTCCCTGAAAACAGTTGTGATCCTCGTGCAGCCATCTGTGGTGCTCCAAATAGCAGTGGGAAGTGGCTGGGTGGTTTATTTGATAAGGATAGCTTTGTTGAGACGCTAGAAGGTTGGGCAAGGACAGTTGTTACAGGAAGAGCAAAGCTTGGAGGAATCCCTGTTGGAATAGTAGCTGTTGAGACCCAGACTGTGATGCAAGTTATCCCTGCAGACCCAGGTCAGCTCGATTCACATGAAAGGGTTGTCCCTCAAGCTGGGCAAGTATGGTTTCCTGATTCGGCCACTAAGACATCTCAAGCATTGTTAGATTTCAACAGGGAAGAGCTCCCACTTTTCATTCTTGCCAACTGGAGAGGGTTCTCAGGTGGGCAGAGGGACCTTTTTGAAGGCATCCTTCAGGCAGGATCAACCATAGTTGAAAATCTTAGAACATACAAGCAGCCTGTTTTTGTCTACATCCCAATGATGGGTGAGCTGCGTGGTGGGGCATGGGTTGTTGTGGACAGTCGGATCAATTCAGACCATATTGAAATGTATGCTGAACGGACAGCCAAAGGAAATGTCCTGGAGCCGGAAGGGATGATTGAGATCAAGTTCAGGACAAAGGAGCTGCTGGAGTGCATGGGTAGGCTTGATCAACAGCTGATCAATCTGAAGGCAAAACTTCAGGAAGCCAAGAGCAGTAGAGTGCATGGAACTGTTGAGTCTCTACAGCAGCAAATAAAAGCCCGTGAGAAGCAGCTTTTGCCAGTCTATACTCAGATAGCCACCAGATTTGCAGAATTGCATGATACTTCTCTGAGGATGGCTGCCAAAGGAGTGATCAAAGAAGTTGTGGACTGGGGTAACTCACGGTCTTTCTTTTATAGAAGACTGCATCGTAGAGTCATCGAGGGATCATTGATCAAGGTCGTGAGAGATGCTGCTGGTGACCAAATGTCGCATAAATGTGCAATGGACTTGATCAAAAAATGGTTTTTGGATTCTGAGATTGCAAGCGGCAGTAAAGATGCTTGGGCTGATGATCAAGCTTTCTTTACATGGAAGAATGATCCTGCAAACTATGAGGAAAAGCTACAGGAGCTGCGGGCCCAGAAGGTATTGCTTCACTTATCGAAAATTGGTGATTCGGCATCAGATTTGCAATCTCTGCCTCAGGGTCTTGCAGCCCTCCTACAGAAGGTGGAGCCCTCAAGCCGAGCGCAATTGATTGGGGAACTCCGGAAGGTGCTCAATTGA 5148 0.4485 MEGIFRYYNLNNSLLFYTLSPQKASASSAAMVSDYVGYLEKGQIPPKHISLVNSQVSLNIEGSKYTIDMVRGGPGSYRLRMNESEIESEIHTLRDGGLLMQLDGNSHIIYAEEEAAGTRLLIGGRTCLLQNDHDPSKLVAETPCKLLRYLISDNSHVDADTPYAEVEVMKMCMPLLSPASGIIQFKMSEGQAMQAGELIARLDLDDPSAVRKAEPFHGSFPILGPPTVISGKVHQRCAASINAARMILAGYDHNIDEVVQNLLSCLDSPELPFLQWQECLAVLATRLPKDLRNELESKYKEFEGISSSQNVEFPAKLLRGVLDAHLCSCPDKEKGAQERLVEPLMSLVKSYEGGRESHARIIVQSLFEEYLSIEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGVRSKNKLILRLMEQLVYPNPAAYRDKLIRFSALNHTSYSELALKASQLLEQTKLSELRSSIARSLSELEMFTEEGENMDTPRRKSAINERMEALVSAPLAVEDALVGLFDHSDHTLQRRVVETYVRRLYQPYLVKGSVRMQWHRSGLIASWEFLEEHLERKNASEDQISDKSLIEKHNEKKWGAMVIIKSLQFLPTVISAALRETTHHFEESIPSGSIEQDSHGNMMHIALVGINNQMSLLQDSGDEDQAQERINKLARILKEQEVSSSLRAAGVGVISCIIQRDEGRAPMRHSFHWSVEKLYYEEEPLLRHLEPPLSIYLELDKLKGYENIKYTPSRDRQWHLYTVVDKQLPIQRMFLRTLVRQPTSEGLTLYQGLDVGTTQTQSTMSFTSKSILRSLMTAMEELELHGHNATVKSDHSHMYLYILQEQQIDDLVPYPKRVVIGAGQEEAGVERILEELAHEIHASVGVRMHRLGVCEWEVKLCIASAGQAYGSWRVVVANVTGHTCTVHIYRELEDASKHRVVYHSKSAQGHLQGVPVNAHYQHLGVLDRKRLLARRSNTTYCYDFPLAFETALQQLWASQSQGINRPNDKVLFKVTELAFADKRGSWGTHLVPVERTPGENDVGMVAWRMEMSTPEFPNGRTILIVANDVTFKAGSFGPREDAFFLAVTDLACSEKLPLIYLAANSGARIGVAEEVKACFKIGWSDESSPERGFQYVYLTPEDYARIGSSVIAHELSMESGETRWVIDTIVGKEDGLGVENLTGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSAILKWLSYVPSHVGGALPILKPSDPPERPVEYFPENSCDPRAAICGAPNSSGKWLGGLFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTSQALLDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMGELRGGAWVVVDSRINSDHIEMYAERTAKGNVLEPEGMIEIKFRTKELLECMGRLDQQLINLKAKLQEAKSSRVHGTVESLQQQIKAREKQLLPVYTQIATRFAELHDTSLRMAAKGVIKEVVDWGNSRSFFYRRLHRRVIEGSLIKVVRDAAGDQMSHKCAMDLIKKWFLDSEIASGSKDAWADDQAFFTWKNDPANYEEKLQELRAQKVLLHLSKIGDSASDLQSLPQGLAALLQKVEPSSRAQLIGELRKVLN* 1716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0411 1715 Coils Coil 656 676 - -
Vvi18g0411 1715 Gene3D - 953 1280 - -
Vvi18g0411 1715 ProSitePatterns Biotin-requiring enzymes attachment site. 160 177 IPR001882 -
Vvi18g0411 1715 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 952 1291 IPR011762 -
Vvi18g0411 1715 Pfam Carboxyl transferase domain 1047 1598 IPR034733 -
Vvi18g0411 1715 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1295 1610 IPR011763 GO:0016874
Vvi18g0411 1715 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 23 1713 - -
Vvi18g0411 1715 Pfam Acetyl-CoA carboxylase, central region 203 944 IPR013537 GO:0003989|GO:0005524|GO:0006633
Vvi18g0411 1715 SUPERFAMILY ClpP/crotonase 1286 1675 IPR029045 -
Vvi18g0411 1715 FunFam Acetyl-CoA carboxylase 1 133 204 - -
Vvi18g0411 1715 SUPERFAMILY Single hybrid motif 135 205 IPR011053 -
Vvi18g0411 1715 Gene3D - 1285 1685 - -
Vvi18g0411 1715 ProSiteProfiles Biotinyl/lipoyl domain profile. 129 203 IPR000089 -
Vvi18g0411 1715 Pfam Biotin-requiring enzyme 138 202 IPR000089 -
Vvi18g0411 1715 SUPERFAMILY ClpP/crotonase 953 1281 IPR029045 -
Vvi18g0411 1715 Coils Coil 1703 1715 - -
Vvi18g0411 1715 Coils Coil 1511 1531 - -
Vvi18g0411 1715 Gene3D - 133 204 - -
Vvi18g0411 1715 FunFam Acetyl-CoA carboxylase 1 1103 1167 - -
Vvi18g0411 1715 FunFam acetyl-CoA carboxylase isoform X2 1285 1685 - -
Vvi18g0411 1715 CDD biotinyl_domain 138 202 - -
Vvi18g0411 1715 Gene3D Biotin dependent carboxylase carboxyltransferase 1103 1167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0411 Vvi-Chr18 4098351 4107100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0411 23 1714 Acyl Lipid Metabolism Gene Families AT1G36160 78.715 0.0 2794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0411 K11262 - vvi:100247288 3339.67