Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0392 ATGGATAAGGTCAATGCAAGGGTTAGATTCAAACCAGAATCAACAGAGCTTCCTTCACTTGAAGAAGAGGGAGGATTAAATGAAGAATATTCAGACTCAGCTATTGGATTTGATGGCTCATCCAATACATCAGAAAGTTTATGTGCTGAAAAGCATGATACCTCCAGCACACATGAAATCGATAGCCTTAAGAGCACAATCTCTGGTGATTTAAATGGACTTTCCCACACTCAAAGTCCTCAGACAGAGAAAGGGGACCCATCAGATCAGAGGTTTTTGGCACAGGGAAGCAATGATTGGGTTCATGGATGGAGTTCAGACTATTCTGTGGATAATGACTTGGCAATTGCTTATGAAGAGAACAATAGGCTTAGAGGAAGCTTGGAAGTTGCGGAGTCTTCTATTATTGAGCTTAAGCTGGAGGTAAGCTCTCTACAAAGTCATGCTGATGAAATAGGTGTTGAAACACAAAAGTTTGCTAAGCAGCTTGCTGCTGAGATTGCTTCAGGAGAAGTTCTTGCCGAAGAGGTTTCTGTACTGAAATTAGAGTGTTCAAAACTCAAGGAGGACCTTGAACACCTCAGAAATTCTAAGTCAATTCCTGAATTTGCTAGCAGAGAAATTATTCGGACAGATCAGGATCATGGATTTGAAGATTCACAGCTGAGATGGCTAAAGGGACTTTTAAATATGGAGGACAAGATAAGAGAGCTTCAAACTAAGGCATGCCTTGGGTTCCATGAAAGGGAGTGCAGGTTCCTTCAGCCAGACTTAGAGGCACTGCTCCATGTTCTGCAGGATCTCAAACAAGGAACTGGACAAGCAATTTCTATGTTCGATGCTTTACCATCAGAAACTGCAAACATAAAGGAGATGAGAGAAAGCCAACAATTTGTGTCAGGAACTGGGTTTGATGCTGAATTGTATCAGCCTGAAGATTTGCTTCATTGCTTAGGTGTATCTGGCCTGGTTTCTCTTGTACCTGATTCTCTAGATGCTACCAATGCAATAAAAGACAAATTCTTTGAACTTCTAAGAGAGTTGGATGAGTCCAAAGCTGAACGGGAAAGCCTTGCAAGAAAAATGGACCAGATGGAGTGCTACTATGAAGCCCTTGTCCAGGAGCTTGAGGAAAACCAGAAGCAGATGCTGGGGGAATTGCAGAATCTCAGAACTGAGCACTCTACTTGCATGTACACAATTTCGTCCACGAAGGCTCAAATGGAGACAATGAGCCAAGACATGAATGAGCAGATCTTAAGATTTGCTGAGGACAGACGTGACTTGAATTCGCTTAACCAGGAGCTTGAAAGAAGGGCTATTACTTCAGAAGCAGCACTTAAAAGGGCACGTTTGAATTATTCGATAGCAGTGGATCAGTTACAAAAAGACCTCGAACTGCTTTCTTTCCAGGTTTTGTCTATGTTTGAGACTAATGAGAAGCTTGTGAAAGAAGCTTTTTCAGAAGCTTCACAACCGTCCTCCCGAGAGTGTCCAGAAACGGTGCAGAATCAGAACTTGGATTCAGAAAATCTTGACATTGCCAAACTCCTACAGTGCCATAATAAAAATGCAGGGGTAAAGAAACCATCCTTGGGTGGAGAAGTTCTTTTAGAGGACTTGAAAAGATCTCTTCACTTGCAGGAAGAGCTTTACCAGAAGGTCGAGGAAGAACTCTGTGAAATGCATTTGGTGAACATAGACCTGGATGTGTTTTCGAAGACTCTAAGAGAAACTTTGCTGGAAGCAAGTGCTGAGATTGCACTTATGAAAGAGAAAATAGATGAACTTAGTCAGCAGTTGGAGCTTTCAACTGAGTCCAAAGAGTTGTTACTGCTAAGGCTGCAGACTGCTATGGATGATGTTCGCATGCTGAATGAGTACAGGGAGAGTTGCATTGCAAAGTGCCATGATCTGGCTCTGCAAAATCAAATTTTAGAAGCAAATTTGGAAAGTGTTTCTAGTGAAAATTTTCGTCTTAGTCAGAAGATTGCAGAGTGGGATGCTCTGGTGATGAAATGCAGAAATTATGAGAGTAAATATGAAGCTTGTGCTGCTGAAAAAATGGAGTTGGCAAATTTATTAAAAGAGGAAGCTCTAGAAAATGGTGGTCTACAAAATGAAATTTCCTCTCTGCAGGAAGAGTTGAAAACTTCCAAAACTGAACTTGATGAGCTGGCTTCTGTGAAGGAAAGTCTGCAGCAAATTGTCAATTTTCTGCAAGATAAGTTGGGAAGTCTATTGGCATGTTATGATGCACAATTAAGTGGATTGCCTCTACAGAGTAAATCCACGTTTCAGGATTTCAAGTTTAAGGACTTCATGGGTGTTGTCTTGCAATTAGAAGAACTTCAACAAAATACACATGGAAAGATTCTTCAACTCATGAAAGAGAAGAAAGATCTAGAGGATGAAAGAGATATTGGTCGATTCTCATTAAGCACAGTAAAATCAGAAACACTTGTCATGAGGCAGAAATTTGAACATGATATACAGGAGATGGTTAGTAAAGTGGATGCTTCCAATGCCCTAGTGCAAAGGCTTCAGTCGGAACTTGAGGTTATTGCTAACAGACTCAAGGTTAGCTTTGAAGCTGAAGAAAAATATGCACAGAAAAGTGGGGAACTTCTCTCTGATTTTGCCTGTTTGGAAGTTGAGCTGCAAGAACTTAGTTCTAAGAACAGGGACCTTGCTCAAGAAATCTTGGGGTTGGAAACTGTTACTGAAGAACTTGGAAAGAGTAAGTCGACTATAGCAGACATTACACTACGTAACCAAGTTTTGATGACATCCTTACAGGTTAAAACCGATGAATCTGTGAAGCTTGCATCAGAGATTAGCAGTTTGAAAGAAAGTTTGAGATGCCTGCAAGAAGAGTTATGTGTTGAAAGAGGCCTCAGAGATAAATTAGAGGGCACAGTTGGAGATCTTACCTTCCAATTGGATGAGAAACATCGCCACTTGATCAATTTTGATCAGCAGAATGCTGAACTGGACCATTTCAAGCAGCAGTTATCTGATTTAGAGTTAGAAAAATCAAGTGTCTGTCAGCGGTTATTGCACAGCGAGGAATGTCTGAAAAAGGTCCACGAATCCTCTTTTACTGATCTGGAAGCTCAGTTATCTGAGATGCATGAATTGTTAATAGCCACAGATGTTAAATTCATTTGCACAAGTAATCAGTATGAGGCCTGTATTGAGGAGCTCACTCAGCGACTTCAGTCTTCAGATAAGCACCTTGAGGAGCTTCACAAAAAGCATCTTGATGTAGAGACCATTCTAAATTCCCATCTTGCTCATGAAGCACATTACATTGAAGAAAATACAGGATTGCTGTCAACTCTCAATTCCCTGAAATCTGAATTAGAAGTCTCTGTTGCTCAAAATAGTGTCCTTTTGGATTCAAACTGTGCTATGATGTCTGAACTTGAGGACTACAAGAACAAGGCTGCAATTTTGGAGGTTAGTCTTCTTAATGATAGAAATCAGCATGCTTTTGATCTTGAGCAGCTGAAGCACGTGATAGTGAGTTCTGAAGAGGAGATTGACAAGCTGTTGTTGACAAAGGAGGAGCTAGAAATCAAAGTCATAGTACTTAAAGAGAAGTTGGATGAATGTCGTGCACGGATAACCATGCTAGAAGGAAGTAGTGATGAACTAACTTTGCTCAGGATCAAGTATAATGAGATTACCCACAGGCTATCTGAACAGATTTTGAAGACTGAGGAGTTTAAGAACTTGTCAATTCATTTGCGGGAGCTTAAAGACAAGGCTGATGCAGAGTGTCTACAGATTCGTGAAAAAAAAGAACCGGAAGGACCACCAGTTGCCATGCAAGATTCGTTGAGAGTTGCCTTTATCAAAGAACAGTGTGAAACGAAGCTGCAAGAACTGAGACACCAGCTATCCATTTCCAAAAAGCATGGCGAGGAGATGCTTTGGAAATTGCAAGATGCTATTGACGAGATCGAGAATAGGAAGAAGTCTGAAGCTTGTCACATAAAGCGAAATGAGGAGCTTTCATTGAAGATCTTGGAATTGGAGGCTGATTTAAATGCAGCATTTTCCGAGAAGCGTGAAAAGATCAATGGTTATGACCGAATAAAGGCTGAAATGGAATGCTCGCTAATAAGCCTTGAATGCTGCAAAGAAGAAAAACAAAACCTTGAAAATTCTTTGCAAGAATGCAATGATGAAAGATATAAAATTGCAGTTGAACTCGCCTCAGTGAAAGAACTGCTCAAGACTTATCCCATGAATATGCAATTGGAAGGAAATCATGGATCACATAAAGTGGAGAGCAGATCTAGTCAGCCAGTTTTAGGGAATGCTTACCAGGAAAATCCACTGGTAGACATAATTTCTCAGAATGGTACGACTGGGAACCTGTACCCTAAGTACTCAGACCAAGATAGTTCATTTAACCATGAAAAAGTAGAAGATACATATTCAACTCTCATTGATGAAGGTGAGCATTCAAGCGGACACATGAGCATGCAACTGCAGCCTTCTCAGCCTGCTGAATCTACTCACATTCATGGAATTCCAAGGGATGGAGTTGTAGACCAAGAGAACTTGCCACAGGATGATACAAAGCATTTAGCTCTTGTCAATGATCATTTCAGAGCCCAAAGTTTGAAGTCTAGCATGGAACACCTGCATAAAGAGTTGGAAAGGATGAAAAATGATAACTCGCTCCTCCCACAAGATGGTCATCAATTGGACACAAATTTTGAAGGTTTACAAAAAGAATTGATGACGTTGCACAAAGCTAATGAAGAATTAGGAAGCATATTCCCTTTGTTTAATGAATTTTCAGGCAGTGGGAATGCATTAGAAAGGGTACTTGCTTTGGAAATTGAGCTCGCTGAAGCATTGCAAGCAAAGAAGAGATCCAGCATCCAATTCCAGAGTTCTTTCCTGAAACAACACAGTGATGAGGCAGCAGTATTCCAAAGCTTTAGAGACATCAATGAGCTGATCAAAGACATGTTGGAACTAAAGGGAAGGTACACAACTGTGGAGACTGAGTTAAAAGAGATGCATGATCGTTACTCTCAACTAAGCCTACAGTTTGCAGAAGTTGAAGGAGAGAGACAGAAACTGATGATGACACTGAAGAATGTCCGAGCATCCAAGAAGTCCCTACAATTGAATCGCCTTTCTTCAGCCACTCCCTGA 5181 0.408 MDKVNARVRFKPESTELPSLEEEGGLNEEYSDSAIGFDGSSNTSESLCAEKHDTSSTHEIDSLKSTISGDLNGLSHTQSPQTEKGDPSDQRFLAQGSNDWVHGWSSDYSVDNDLAIAYEENNRLRGSLEVAESSIIELKLEVSSLQSHADEIGVETQKFAKQLAAEIASGEVLAEEVSVLKLECSKLKEDLEHLRNSKSIPEFASREIIRTDQDHGFEDSQLRWLKGLLNMEDKIRELQTKACLGFHERECRFLQPDLEALLHVLQDLKQGTGQAISMFDALPSETANIKEMRESQQFVSGTGFDAELYQPEDLLHCLGVSGLVSLVPDSLDATNAIKDKFFELLRELDESKAERESLARKMDQMECYYEALVQELEENQKQMLGELQNLRTEHSTCMYTISSTKAQMETMSQDMNEQILRFAEDRRDLNSLNQELERRAITSEAALKRARLNYSIAVDQLQKDLELLSFQVLSMFETNEKLVKEAFSEASQPSSRECPETVQNQNLDSENLDIAKLLQCHNKNAGVKKPSLGGEVLLEDLKRSLHLQEELYQKVEEELCEMHLVNIDLDVFSKTLRETLLEASAEIALMKEKIDELSQQLELSTESKELLLLRLQTAMDDVRMLNEYRESCIAKCHDLALQNQILEANLESVSSENFRLSQKIAEWDALVMKCRNYESKYEACAAEKMELANLLKEEALENGGLQNEISSLQEELKTSKTELDELASVKESLQQIVNFLQDKLGSLLACYDAQLSGLPLQSKSTFQDFKFKDFMGVVLQLEELQQNTHGKILQLMKEKKDLEDERDIGRFSLSTVKSETLVMRQKFEHDIQEMVSKVDASNALVQRLQSELEVIANRLKVSFEAEEKYAQKSGELLSDFACLEVELQELSSKNRDLAQEILGLETVTEELGKSKSTIADITLRNQVLMTSLQVKTDESVKLASEISSLKESLRCLQEELCVERGLRDKLEGTVGDLTFQLDEKHRHLINFDQQNAELDHFKQQLSDLELEKSSVCQRLLHSEECLKKVHESSFTDLEAQLSEMHELLIATDVKFICTSNQYEACIEELTQRLQSSDKHLEELHKKHLDVETILNSHLAHEAHYIEENTGLLSTLNSLKSELEVSVAQNSVLLDSNCAMMSELEDYKNKAAILEVSLLNDRNQHAFDLEQLKHVIVSSEEEIDKLLLTKEELEIKVIVLKEKLDECRARITMLEGSSDELTLLRIKYNEITHRLSEQILKTEEFKNLSIHLRELKDKADAECLQIREKKEPEGPPVAMQDSLRVAFIKEQCETKLQELRHQLSISKKHGEEMLWKLQDAIDEIENRKKSEACHIKRNEELSLKILELEADLNAAFSEKREKINGYDRIKAEMECSLISLECCKEEKQNLENSLQECNDERYKIAVELASVKELLKTYPMNMQLEGNHGSHKVESRSSQPVLGNAYQENPLVDIISQNGTTGNLYPKYSDQDSSFNHEKVEDTYSTLIDEGEHSSGHMSMQLQPSQPAESTHIHGIPRDGVVDQENLPQDDTKHLALVNDHFRAQSLKSSMEHLHKELERMKNDNSLLPQDGHQLDTNFEGLQKELMTLHKANEELGSIFPLFNEFSGSGNALERVLALEIELAEALQAKKRSSIQFQSSFLKQHSDEAAVFQSFRDINELIKDMLELKGRYTTVETELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNVRASKKSLQLNRLSSATP* 1727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0392 1726 Coils Coil 1066 1086 - -
Vvi18g0392 1726 Coils Coil 880 907 - -
Vvi18g0392 1726 MobiDBLite consensus disorder prediction 60 93 - -
Vvi18g0392 1726 Coils Coil 991 1011 - -
Vvi18g0392 1726 MobiDBLite consensus disorder prediction 1 93 - -
Vvi18g0392 1726 Coils Coil 580 607 - -
Vvi18g0392 1726 MobiDBLite consensus disorder prediction 34 50 - -
Vvi18g0392 1726 Coils Coil 939 959 - -
Vvi18g0392 1726 Coils Coil 1337 1357 - -
Vvi18g0392 1726 Coils Coil 1168 1209 - -
Vvi18g0392 1726 Coils Coil 1543 1563 - -
Vvi18g0392 1726 Coils Coil 831 851 - -
Vvi18g0392 1726 Coils Coil 538 558 - -
Vvi18g0392 1726 Coils Coil 341 393 - -
Vvi18g0392 1726 Coils Coil 695 743 - -
Vvi18g0392 1726 Coils Coil 1379 1399 - -
Vvi18g0392 1726 MobiDBLite consensus disorder prediction 1 18 - -
Vvi18g0392 1726 Coils Coil 177 197 - -
Vvi18g0392 1726 Coils Coil 419 453 - -
Vvi18g0392 1726 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 5 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0392 Vvi-Chr18 3944525 3956090 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0392 - - vvi:100255792 3253.38