Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0387 ATGGAAAATGAAAGCTCAACTGAGAAAAATGTGGTGAATTCTTCAACACCTGAAAAGGAGGGAGAAGTATGTTATCCACAGAAAGATCATGGAGAACAAATGAAAGCTTTGAGGATCAGTGAGGAAAGTCCCAATCCAGATAGCAATGAGGGTCTAGATGACTCGAATAACAAGGTGGATGATAGGAAGGAATTGGGGTCTGAAAATAAAAAAGAAATGAATCAGGATGACTTGAATAACCAGGTTGATGAAAGTAAGGAATTGGAGTCTGAAAATAAAAGCGAAACATATCAGGATATCAAGGAAAATCTTAGTGAGGAGAAGGAACCAGAGCCTGTCTTTGATGGAACTGAGATTCCTGGGATGGAAGCTAGCAGGAGTATGTCTACCCGTCCTTTGGATCTTGACACAGAAACACAAGGTTCTGCTTGGCCTGAGAAGGCTGTAGCACTTAAAAACTTTGTCAAGGAGAAAGGTACAGTTGCAGTCTCTAGTGTTTTGCGTGTCCTTTCGGGGAAAACAGAGGAGGATGTACATGCTGCTCAGGATGATGAAGATAAGAATAAAACTGGTGTTAAGGAGGTTGTAGATTCCCCCAAAGAAGGTGAAGCCAAAGAAGCATCTCAAAAACCAGTGGAACGGTCTGCATGGAATCCCCTAAACTATATTAAGATTTCGCGAGAAGTTGATGCAGAAAACAAAACCGAACAGAAGGAGGAAATCATTGAAGAACCTGCACGTCCAGTGGGTATGAAAGGAAGAATTATACTGTATACAAGATTAGGATGCCAGGAAAGTAAAGAGGTTCGGCGATTTCTACTTCAGAGAAGACTCAGATATGTTGAAATTAACATTGATGTGTACCCTAGCAGAAAGCTAGAGCTAGAAAAAATTGCAGGGTCTTGTGCTGTTCCGAAGTTGTTTTTTAATGAAGTCCTTATAGGGGGATTGAATGAGGTAAAGGGCCTTGATGAGTCTGGCAAGCTTGATGAGAAGATTAATTATGTGATTTCTGAAGCACCATCATTTGAAGCTCCTTTGCCACCACTTTCTGGTGAAGATGACTTGTCCAGTAGTGGGGCAATTGATGAACTAGCTGCTATTGTCCTCAAAATGAAAGAATCTATTGTTGTTAAGGACCGTTTTTATCGAATGCGCAGGTTCACCAACTGCTTTCTGGGCTCAGAAGCTGTGGATTTTATATCAGAAGATCAATACTTGGAAAGGGAAGAGGCTATTGAATTTGGGCGAAAACTTGCAAGTAAACACTTCTTCCAAAACGTTCTTGATGAGAATGATTTTGAGGATGGCAACCATTTGTACCGGTTCTTGGACCATGATCCTGTAGTGTCGTCTCAGTGTCACAATTTCCTGAGGGGCATACTTGATGTGAAGCCAAAGCCTATAATAGAAATTGCATCAAGGCTTAGATTTTTGTCTTATGCTATCTTTGAAGCTTACACATCAGAAGATGGAAAGCATGTTGATTACAGAAGTATCCATGGGAGTGAGGAATTTGCTAGGTATTTGAGAATAGTTGAGGAGCTCCAAAGAGTAGATTTGCAGGATATGCCAAGGGAAGAGAAGCTTGCTTTCTTTATAAATCTCTACAACATGATGGCCATCCATGGAATATTGGTGTGGGGTTTTCCAGTTGGACCACTTGAGAGAAGGAAGCTTCTTGGAGAATTTAAATATGTTGTTGGTGGGTGCACCTATTCACTTTCTGTTATTGCAAATGGCATCTTAAGGGGCAACCAGCGACCGCCATACAACCTCATTAAGCCATTTGGAATGAGAGACAGACGTGCCAAGGTGGCTCTTCCTTACCCGGAGCCTCTTATCCACTTTGCACTGGTTTTTGGTACCCGATCTGGCCCTCCTCTCAAATGCTACTCACCTGGGAACATTGATCAAGAATTGGTGGAAGCAGCCCGTAATTTTGTAAGAAGTGGAGGATTAATTCTAGATGTTAATGCAAAGGTCGTATCAGCCAGTAAGCTCCTAAAATGGTATAGTGTAGATTTTGGCAAGAACGAAGTTGAGGTATTAAAGCATGCAGCAAACTACTTGGAGCCACCCATCTCCGAAGAGTTACTGGAGGTGCTTGCTACCGGCCAGTTGAAAGTGATATATCAGCCTTATGACTGGGGATTGAACTGCTAG 2166 0.4197 MENESSTEKNVVNSSTPEKEGEVCYPQKDHGEQMKALRISEESPNPDSNEGLDDSNNKVDDRKELGSENKKEMNQDDLNNQVDESKELESENKSETYQDIKENLSEEKEPEPVFDGTEIPGMEASRSMSTRPLDLDTETQGSAWPEKAVALKNFVKEKGTVAVSSVLRVLSGKTEEDVHAAQDDEDKNKTGVKEVVDSPKEGEAKEASQKPVERSAWNPLNYIKISREVDAENKTEQKEEIIEEPARPVGMKGRIILYTRLGCQESKEVRRFLLQRRLRYVEINIDVYPSRKLELEKIAGSCAVPKLFFNEVLIGGLNEVKGLDESGKLDEKINYVISEAPSFEAPLPPLSGEDDLSSSGAIDELAAIVLKMKESIVVKDRFYRMRRFTNCFLGSEAVDFISEDQYLEREEAIEFGRKLASKHFFQNVLDENDFEDGNHLYRFLDHDPVVSSQCHNFLRGILDVKPKPIIEIASRLRFLSYAIFEAYTSEDGKHVDYRSIHGSEEFARYLRIVEELQRVDLQDMPREEKLAFFINLYNMMAIHGILVWGFPVGPLERRKLLGEFKYVVGGCTYSLSVIANGILRGNQRPPYNLIKPFGMRDRRAKVALPYPEPLIHFALVFGTRSGPPLKCYSPGNIDQELVEAARNFVRSGGLILDVNAKVVSASKLLKWYSVDFGKNEVEVLKHAANYLEPPISEELLEVLATGQLKVIYQPYDWGLNC* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0387 721 MobiDBLite consensus disorder prediction 174 210 - -
Vvi18g0387 721 MobiDBLite consensus disorder prediction 1 17 - -
Vvi18g0387 721 SUPERFAMILY "Winged helix" DNA-binding domain 364 453 IPR036390 -
Vvi18g0387 721 SMART DEP_3 372 445 IPR000591 GO:0035556
Vvi18g0387 721 Pfam Protein of unknown function, DUF547 522 649 IPR006869 -
Vvi18g0387 721 Gene3D - 359 450 IPR036388 -
Vvi18g0387 721 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 23 721 - -
Vvi18g0387 721 ProSiteProfiles DEP domain profile. 372 445 IPR000591 GO:0035556
Vvi18g0387 721 SUPERFAMILY Thioredoxin-like 246 334 IPR036249 -
Vvi18g0387 721 Coils Coil 71 91 - -
Vvi18g0387 721 ProSiteProfiles Glutaredoxin domain profile. 243 340 - -
Vvi18g0387 721 MobiDBLite consensus disorder prediction 174 211 - -
Vvi18g0387 721 Gene3D Glutaredoxin 249 336 - -
Vvi18g0387 721 MobiDBLite consensus disorder prediction 22 37 - -
Vvi18g0387 721 MobiDBLite consensus disorder prediction 1 141 - -
Vvi18g0387 721 Pfam Glutaredoxin 255 314 IPR002109 -
Vvi18g0387 721 MobiDBLite consensus disorder prediction 53 114 - -
Vvi18g0387 721 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 376 443 IPR000591 GO:0035556
Vvi18g0387 721 CDD DEP 364 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0387 Vvi-Chr18 3913313 3917059 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0387 - - vvi:100257505 1432.54