Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0362 ATGGCAAGGGTTAACAAAGTGAGACGAAAGGCTAATTCCCGACTTCACAGGGCAACCCCATTCCCATTATCATCTCACCCTCGCAAGGTTCTGAAAGATGTTCATCTGAAGAAGAAACACTCTAAAGCATTGGCAAAAAAAGACTGGGAAGATGCAACCTGCTCAGTTTGTATGGAGTTCCCTCACAATGCTGTACTACTCCTTTGCTCCTCCTATGAGAAAGGTCTTCCTAATGAAAAGATGGAAGTGTCAGAGCTTCTGTGTCCACTCTGCCGAGGACAGGTGAAAGGTTGGACAGTGGTGGAACCAGCACGTAAGTATCTCAATGCCAAGAAGAGAACATGCATGCAGGATAACTGCTCATATGTTGGAACATACAAACAACTCAGGAAGCATGTTAGAGCAGAGCACCCACTGGCACGACCTCGTGAAGTGGACCCTTCACTTGAAGAGAAATGGAAGAGGCTTGAAGGTGAAAGAGAACGGAATGATGTGCTCAGTACAATTAGATCATCAATGCCAGGTGCATTGATTCTGGGGGATTATGTGATAGAGGGTAACTATCATGGGTTTTATAGAGATTATGCTGAGTATGATGCAGAAGCATATTTTGATGATGCTCTTTTCTCTTTGGATTCTTTTGGTAGAGGGCGGAGGGGAGGTATCCACTTGGGTAGCAGATTTAACAGAACATATGATTTATTGGATGAGGAAGACCATGAGATGCGTCGCCATGTGGCTGCACCTGGACGTGGTCTCCACAGGTTGCTGTATGGGAGGTCAAGAAGGCGACAAAGGCACAGAGAAGCTAATGGAGAACGTTAA 825 0.4558 MARVNKVRRKANSRLHRATPFPLSSHPRKVLKDVHLKKKHSKALAKKDWEDATCSVCMEFPHNAVLLLCSSYEKGLPNEKMEVSELLCPLCRGQVKGWTVVEPARKYLNAKKRTCMQDNCSYVGTYKQLRKHVRAEHPLARPREVDPSLEEKWKRLEGERERNDVLSTIRSSMPGALILGDYVIEGNYHGFYRDYAEYDAEAYFDDALFSLDSFGRGRRGGIHLGSRFNRTYDLLDEEDHEMRRHVAAPGRGLHRLLYGRSRRRQRHREANGER* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0362 274 Pfam Protein of unknown function (DUF1644) 80 167 IPR012866 -
Vvi18g0362 274 Pfam Protein of unknown function (DUF1644) 50 75 IPR012866 -
Vvi18g0362 274 MobiDBLite consensus disorder prediction 1 15 - -
Vvi18g0362 274 PANTHER OS01G0612600 PROTEIN 1 76 - -
Vvi18g0362 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 140 IPR013083 -
Vvi18g0362 274 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0362 Vvi-Chr18 3588961 3589932 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0362 - - vvi:100259117 488.804