Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0355 ATGGCTTCTCAGCTTCTCAACACAAACCCTAGAGGGTCGAAACCCTTAAACCCAAACGCACATGCTTTCCAGCCATGGAAATCATTGAAAGCTTATTATCTTCCACATCACTTGTACGAAACACAGGAAAGGATGCAACTGCCGGCAGCGGCGACGGTGCTGGATTTCGCTTATCAGCCTGTTTCCTTGCCACTGTTGAGATATTCCGGTTTGGGTTGCTACAGTGCACAGTTTCATCATCAACCGCTGCACCTGCGAGCTTCTTCCATTCTTTACCCTAGTGGCGACTTTCCCATTACCTATGTGGGTTCTACGAAAGATTCGGTCACTGAAGTGATGGAGGATTTGGGGGATTCGGTGTCTTCGAGAGGTGAGACAAGGAAAGTAAGTGGGGTTCCGATGAAGAAGATGATTGCACCGAGATTGAAAAGGTCGCAGAGGAGGAGTTCTATGGCAGGCGGGGACAAAAATGGGACCTCTGTTTGGAGGGCCAGAAAGTTTTTGAACGGTGATGGTTGTGGAGATGATCCTTTGCCTCCCTCTGATGTCAATGCCTTTGAACTTTCTCTATCTGGGAAAACTACTGTGATGATTAGAAATATTCCAAACAAAATGAGTAGGAAAGATATGCTACAATTACTCGATGAGTGTTGCCAAGTAGAGAACAGAAACGCGGAGTTGCGATGTGACTCGCTTCGTACTGAGTATGACTTTGTCTACTTGCCCATGGATTTTAGGTTTAAGTGCAGCAATAAGGGCTACGCATTTGTGAACTTCACCACAGATGTTGCCGCATTTAGGATCTGCAAATACTTGCACAACACCACATGGGCGGCTTACGGGACCAAGAAAATATGTGAAATCACAGGCGCCAGAATCCAGGGTCATTTGACCAGTAGAAATATTCTATGA 912 0.4616 MASQLLNTNPRGSKPLNPNAHAFQPWKSLKAYYLPHHLYETQERMQLPAAATVLDFAYQPVSLPLLRYSGLGCYSAQFHHQPLHLRASSILYPSGDFPITYVGSTKDSVTEVMEDLGDSVSSRGETRKVSGVPMKKMIAPRLKRSQRRSSMAGGDKNGTSVWRARKFLNGDGCGDDPLPPSDVNAFELSLSGKTTVMIRNIPNKMSRKDMLQLLDECCQVENRNAELRCDSLRTEYDFVYLPMDFRFKCSNKGYAFVNFTTDVAAFRICKYLHNTTWAAYGTKKICEITGARIQGHLTSRNIL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0355 303 Pfam RNA recognition motif 2 193 296 IPR007201 -
Vvi18g0355 303 Gene3D - 109 292 IPR012677 -
Vvi18g0355 303 SUPERFAMILY RNA-binding domain, RBD 188 277 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0355 Vvi-Chr18 3555522 3560233 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0355 - - vvi:100855348 609.757