Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0352 ATGCCCTTCACGAGTTTCCTTCGCTGTCTTTCTCCACAGAATCCTCTCTCCTTTCCCTCCCTTCGCAAACTCCTTCATCCACCGAAGAAGCCTTGCAGTCTATCTCTACCGCTTGCCGCATCAGTTTTTCAATGTTTGCTCACCGACCAAGCGGAGTGTAAGAGAAAATTGGGAAGGAAGTTTGAGTTCGGTCTTTTGTGCTCCTTAGCAATGGATTCACAATCAACCAGCCTTCTGGTGTTATGTGGAAAATCGTCTGCTGAGATTGAATTTGCTAAATCTCTGAAGGCCAAAAACACTCTCAAACTCCCCGATAACGGTGAAGTGTCGATTCTTTTGCACCCGGAGATCGAAAAACCTGAAGAAGAGCCTTTTCAGATGGATTTGTTTATGAGTTCTCTGTCAACGAATACTTTTGGTAGGTTCCTTATTTGGTCTCCGCAGTTGCCTTCGACCCACGACGTTGTTTCTCAAAATTTTTGTGAGCTGCCCATTGGTACCGTATGTGTTGCTGATGTTCAACTCAAAGGACGAGGTCGGTCTAAGAATAAGTGGGAATCTCCAAGGGGCTGCCTTCTGTTTTCTTTTACATTACAAATGGAGGATGGTCGGACAGTGCCCCTTTTACAATATGTTGTTTCTCTCGCTATTACAGAAGCAATAAAGAGCATATGCGACTCAAAGGGATTACCACATCTTGATGTTAAAATAAAGTGGCCAAATGATCTGTACTTAAATGGTCTTAAAGTTGGAGGCATTTTATGCACCTCAACATATAAATCACGGAAGTTCAATGTCAGCGCTGGTATAGGCTTGAATGTTGATAATGAGAAACCGACAACATGCTTGAATGCAGTACTACGAGAATTATCTTCTGTTGCTTACCAATTTAGAAGAGAAGATATCGTTGCAGCTTTCTTCAATAAATTTGAGACTTTTTTTAGTCTTTTCATAAATCAAGGATTTCAAACTCTTGAAGAACTATACTGTAAGACATGGCTACATAGTGGGCAGAGAGTTATCGTACAAGAAAATATTGAGGGCCAAATGGTGGAAAATGTAGTAACAATTCAGGGTCTGGCATCCTCGGGATACTTGTTAGCTATTGGTGATGATGGTCAAATGTGTGAGCTTCATCCTGATGGAAATAGCTTCGACTTCTTCAAAGGACTGATCAGGAGGAAACTAGAGTGA 1194 0.4171 MPFTSFLRCLSPQNPLSFPSLRKLLHPPKKPCSLSLPLAASVFQCLLTDQAECKRKLGRKFEFGLLCSLAMDSQSTSLLVLCGKSSAEIEFAKSLKAKNTLKLPDNGEVSILLHPEIEKPEEEPFQMDLFMSSLSTNTFGRFLIWSPQLPSTHDVVSQNFCELPIGTVCVADVQLKGRGRSKNKWESPRGCLLFSFTLQMEDGRTVPLLQYVVSLAITEAIKSICDSKGLPHLDVKIKWPNDLYLNGLKVGGILCTSTYKSRKFNVSAGIGLNVDNEKPTTCLNAVLRELSSVAYQFRREDIVAAFFNKFETFFSLFINQGFQTLEELYCKTWLHSGQRVIVQENIEGQMVENVVTIQGLASSGYLLAIGDDGQMCELHPDGNSFDFFKGLIRRKLE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0352 397 CDD BPL 142 317 IPR004408 GO:0004077|GO:0036211
Vvi18g0352 397 SUPERFAMILY Class II aaRS and biotin synthetases 128 333 IPR045864 -
Vvi18g0352 397 Gene3D Bira Bifunctional Protein; Domain 2 131 332 IPR045864 -
Vvi18g0352 397 PANTHER BIOTIN PROTEIN LIGASE 72 395 - -
Vvi18g0352 397 Pfam Biotin/lipoate A/B protein ligase family 147 273 IPR004143 GO:0036211
Vvi18g0352 397 Pfam Biotin protein ligase C terminal domain 335 390 IPR003142 GO:0036211
Vvi18g0352 397 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 128 318 IPR004143 GO:0036211
Vvi18g0352 397 NCBIfam biotin--[acetyl-CoA-carboxylase] ligase 146 351 IPR004408 GO:0004077|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0352 K01942 - vvi:100248922 659.448