Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0344 ATGAAATCCAAGAACCATCATCAGCCAACCCCCGTCTGCAATGGCAACACTAGCGAAAGCAGCTCACCGAGTCCGCCACCCTCGCCTCGCCGGCACTCTGCTGTGCCCCATTGCCGCCGGCTGCTCCGCTCCAAGACTTTTTCTCAGTCCCGCCGTGAGAGCTCCGTCGCCGGCATTATTATTCGGCGTGGTCTTCGGTACTTCCTGCTTCTGCCTCTGTTCTACATCTCTGGACTGCTCATGTGCGTGGGTCCCTTCTCTGGTCTTGTGTGGCAGGCTCCTCTCCCTGGTTCAGTCTACCGTAGCCACGAGATCTTTGAGAAGCTTTGGCACGAAATTGAATCCGATAATTCCTCAGCTATTGAGTTGTCTTCTGTATGGAGATACAATAGGAGGCTGAAAGAGCAGAAACCTTGTCCAAACACAAGCTATAGACACCATTTTGCTACAAAACGTGAGTCGCCTGACCCTAGTGGCTACTTGATTGTTGAGGCTAATGGCGGCCTTAATCAACAGCGCTCATCGATCTGCAATGCAGTGGCTGTAGCTGGGCTTTTGAATGCAATACTAGTCATTCCTCACCTTGATTTTCACAGTGTTTGGGTGGATCCAAGTGAGTTTGGGGATATTTATGATGAGGACCATTTCATAACCACCCTCAAAGGGTTTGTAGAAGTGGTCCAGGAGCTACCGGAGGTAGTGATGGAAAGATATGATTACAACATTACTAATATACCAAACATTCGAATTGAAGCTTGGGCTCCTGTAAGTTATTACTTGGAAGAAGTTTATCCAGTCTTACGCAAGCAAGGAGTTATTCGCATAGCCCCATTTGCTAATAGATTGGCAATGAATGTTCCTCCTCGTGTTCAATTCCTGAGATGCTTAGCCAACAACGTAGCATTGAGGTTCTCTTTTCCTGTTTCAACTCTTGCTAGGAAATTAGTTAAACGAATGATTGAGAAGAGCTCAAGAACTGGTGGAAAGTATGTTTCTGTCCACCTTCGTTTTGAGGAGGACATGGTGGCCTTCTCATGCTGTCTATATGATGGAGGAAAAGCTGAAAATTTTGAAATGGACTTAGTTCGAGAAAAAGGGTGGAGGGGAAAGTTTAGGCGTAAAGACCGTTTAATTCAACCTGGTCTCAATCGAATTAATGGAAAATGCCCTCTAACTCCTTTGGAGGTAGGAATGATGCTACGGGGTATGGGATTTGATAACAACACTTCAATTTATTTGGCCTCTGGGAAAATATACCAGGCGGAGCGACATTTGGATCCTCTACTAAAGATGTTTCCCCTTCTCTATACCAAGGAGTCCCTTGCAACCTCAGATGAGCTTGCACCTTTTAAGGGCTATTCTTCAAGGTTGGCTGCATTGGACTACACAGTATGTCTGTTTAGTGAAGTTTTTGTGACAACTCAGGGTGGAAACTTCCCCCATTTCCTGATGGGTCACAGGAGATTCCTCTTTGGTGGACATGCTAAGACCATTCAACCTGACAAGCGGAAGCTCGTTATTCTGCTGCAGGACATGGATATTAGTTGGAAAGCTTTCAAGAATGAGATGGAATCAATGCTTATCGAGAGTGATCGGAAGGGGATGAATGTACCCAGAATTAAAAAGTCCAGAAGAAAGTCTTCCATCTATACCTACCCTTTGCCAGAATGCAGGTGTCTCCTGGAATCACAAAACTCAACAATCAAATTTACTCATACTACCCACATGCTTGATGATGAGGCTGAATCCGTGGTATAA 1758 0.4556 MKSKNHHQPTPVCNGNTSESSSPSPPPSPRRHSAVPHCRRLLRSKTFSQSRRESSVAGIIIRRGLRYFLLLPLFYISGLLMCVGPFSGLVWQAPLPGSVYRSHEIFEKLWHEIESDNSSAIELSSVWRYNRRLKEQKPCPNTSYRHHFATKRESPDPSGYLIVEANGGLNQQRSSICNAVAVAGLLNAILVIPHLDFHSVWVDPSEFGDIYDEDHFITTLKGFVEVVQELPEVVMERYDYNITNIPNIRIEAWAPVSYYLEEVYPVLRKQGVIRIAPFANRLAMNVPPRVQFLRCLANNVALRFSFPVSTLARKLVKRMIEKSSRTGGKYVSVHLRFEEDMVAFSCCLYDGGKAENFEMDLVREKGWRGKFRRKDRLIQPGLNRINGKCPLTPLEVGMMLRGMGFDNNTSIYLASGKIYQAERHLDPLLKMFPLLYTKESLATSDELAPFKGYSSRLAALDYTVCLFSEVFVTTQGGNFPHFLMGHRRFLFGGHAKTIQPDKRKLVILLQDMDISWKAFKNEMESMLIESDRKGMNVPRIKKSRRKSSIYTYPLPECRCLLESQNSTIKFTHTTHMLDDEAESVV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0344 585 MobiDBLite consensus disorder prediction 1 21 - -
Vvi18g0344 585 CDD O-FucT_plant 160 497 IPR024709 -
Vvi18g0344 585 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 60 565 IPR024709 -
Vvi18g0344 585 PIRSF UCP009360 31 562 IPR024709 -
Vvi18g0344 585 Pfam GDP-fucose protein O-fucosyltransferase 160 489 IPR019378 -
Vvi18g0344 585 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0344 Vvi-Chr18 3401893 3410869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0344 138 559 Miscellaneous Gene Families AT1G22460 37.385 1.62e-87 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0344 - - vvi:100242116 1172.53