Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0343 ATGGCCGGTGGAAAGGTGTCCTTCAAGGTCACGCTCACTTCCGATCCAAAACTTCCGTTCAAAGTCTTTAGCGTTCCAGAAGCGGCTCCGTTCACCGCCGTCCTGAAATTCGCAGCTGAAGAATTCAAAGTTCCTCCTCAGACCAGCGCTATCATCACCAACGATGGTGTAGGAATCAATCCTCAACAAAGTGCAGGTAATGTTTTTCTCAAACATGGTTCTGAACTCCGCCTGATTCCCCGTGATAGAGTTGGAGCTTTTGCGACTTTGGGTGCTGCCTTAGTATCAGGGTGA 294 0.4932 MAGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAFATLGAALVSG* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0343 97 CDD Ubl_UFM1 6 80 - -
Vvi18g0343 97 PIRSF Ufm1 1 87 IPR005375 GO:0071569
Vvi18g0343 97 PANTHER UBIQUITIN-FOLD MODIFIER 1 2 89 IPR005375 GO:0071569
Vvi18g0343 97 Gene3D - 3 86 - -
Vvi18g0343 97 FunFam Ubiquitin-fold modifier 1 2 87 - -
Vvi18g0343 97 Pfam Ubiquitin fold modifier 1 protein 5 79 IPR005375 GO:0071569
Vvi18g0343 97 SUPERFAMILY Ubiquitin-like 3 85 IPR029071 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0343 K12162 - vvi:100264401 191.815