Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0341 ATGGCTTCCGAGAAGGTTGAGACCATTGTTGCCGGCAACTACTTGGAGATGGAAAGGGAAGAAGGCGATTCCAAGTCGACTAAGAGCAGATTATCGGCCTTGTTTTGGCACGGCGGCTCGGTCTATGATGCCTGGTTCAGCTGTGCTTCTAATCAGGTTGCCCAAGTGCTTCTCACACTGCCTTACTCGTTTTCACAACTGGGGATGTTATCTGGAATTCTCTTTCAACTGTTTTATGGGTTGATGGGGAGTTGGACTGCTTATCTCATAAGCGTACTTTATGTTGAGTACAGAACTAGAAAGGAGAGAGAAAAGGTTGATTTTAGAAATCATGTAATTCAGTGGTTTGAAGTCCTTGATGGGCTTTTGGGGAAGCACTGGAGGAATGTAGGCCTACTTTTCAACTGCACTTTCCTTCTCTTTGGCTCCGTGATACAGCTGATTGCCTGTGCAAGCAACATCTACTACATAAATGACAATTTCGACAAGAGAACTTGGACGTACATCTTCGGCGCCTGCTGTGCTACGACCGTTTTCATTCCTTCATTCCATAATTACAGAATTTGGTCATTCTTAGGCCTTATGATGACCACCTACACTTCTTGGTATCTAACCATTGCTTCCTTTATCCATGGGCAGGTTGAGGGGGTGAAGCACTCTGGCCCAACCAAAATGGTTCTCTACTTCACTGGGGCTACCAACATTCTCTACACCTTTGGTGGTCATGCTGTCACAGTGGAGATAATGCATGCGATGTGGAAGCCCCAAAGGTTCAAGCTAATATACTTGACAGCAACTCTCTATGTGCTGACCCTAACACTGCCGTCAGCTTCCGCTGTTTATTGGGCTTTTGGGGATATGCTCCTTAACCATTCCAATGCTTTCTCTTTGCTGCCAAGGTCTGGATACAGAGACACTGCTGTCATCCTCATGCTCATTCATCAGTTCATAACATTCGGATTTGCATGCACTCCTCTGTACTTTGTTTGGGAAAAGTTCGTCGGTGTGCACGACACAAAGAGTGTGTGCAAGCGAGCCCTAGCCCGACTACCCGTGGTGATCCCCATATGGTTCCTGGCCATCATTTTCCCTTTCTTCGGTCCCATCAACTCCACAGTTGGATCACTTCTTGTCAGCTTCACCGTCTACATAATCCCAGCCTTAGCTCACATGATAACATTTTCTTCGCCATCTTCTAGAGAGAATGCAGTGGAGAGACCACCGTCATTCTTAGGAGGTTGGGCCGGCGTATACTCAATGAACGCCTTTGTGGTGGGATGGATTTTGGTGGTGGGATTCGGGTTTGGAGGGTGGGCAAGCATGCTCAACTTCATTCAACAAATTAATACATTTGGACTCTTCACAAAATGCTACCAGTGCCCTCGCAAGGCTTGA 1395 0.4674 MASEKVETIVAGNYLEMEREEGDSKSTKSRLSALFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNVGLLFNCTFLLFGSVIQLIACASNIYYINDNFDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTTYTSWYLTIASFIHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQRFKLIYLTATLYVLTLTLPSASAVYWAFGDMLLNHSNAFSLLPRSGYRDTAVILMLIHQFITFGFACTPLYFVWEKFVGVHDTKSVCKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFSSPSSRENAVERPPSFLGGWAGVYSMNAFVVGWILVVGFGFGGWASMLNFIQQINTFGLFTKCYQCPRKA* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0341 464 Pfam Transmembrane amino acid transporter protein 37 419 IPR013057 -
Vvi18g0341 464 PANTHER OS05G0424000 PROTEIN-RELATED 43 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0341 Vvi-Chr18 3380695 3383119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0341 2 460 Organic Solute Cotransporters AT2G21050 84.096 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0341 K13946 - vvi:100243769 949.888