Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0339 ATGGCGGTAGAGAGAGTGCAAACCATCGCATTTTCATCCATCTTGGTGGACACCATCCCACCCGAGTTCATTAGATCTGAAAAAGAACAACCTGCTCTCACAACCTGTCTTGGGTGTATCCCTCAAGTCCCCACCATTGATTTCAGCGACCCAGATGAAGGCAACCTCACAAGATTGATTGCGGAGGCTAGCAGCGAGTGGGCGATGTTCCAGATTGTGAATCATGGCATTCCTAGTGAGGTTATTACCAATTTGCAGAAGGCTGGCAAGGAGTTCTTTGAGCTCCCACAAGAGGAAAAGGAACTTTACGCCAAGCCTCCTGATTCCAAGTCCATTGAAGGCTATGGAAGCAAGCTGCAAAAAGAAGTGGAGGGCAAGAAAGCTTGGGTTGATCACTTGTTCCATAACATCTGGCCCCCTTCTGCTATCAACTATCAGTACTGGCCTAAAAACCCACCTTCGTACAGGGCTGTGAATGAAGAGTACTGCAAGTGGGTACAACCAGTGGGACATAGGTTACTCAGTTTGCTGTCATTAGGGTTAGGACTGGAAAAAAATGAGCTCAAAGAGAACGTGGGTGGTGATGAATTGAAGTACCTTTTGAAGATCAATTATTACCCACCATGTCCTCGTCCAGACCTGGCTCTCGGGGTGGTTGCCCACACCGACATGTCCTCCATTACCATTCTCGTTCCCAACGAAGTTCAGGGCCTGCAGGTCTTTAGAGATGATCATTGGTTTGATGTCAAGTACATCCCTGATGCCCTTGTCATTCATATTGGTGACCAGTTGGAGATTTTGAGCAATGGCAAGTACAAGAGTGTGCTTCACAGAACAACTGTGACCAAGGAGATAACCAGAATGTCGTGGCCTGTGTTCTTGGAGCCGCCATCGGAGTTGGCCATCGGTCCTCTTCCAAAGCTCATTAATGAAAAGAATCCACCAAAATATCAGAAGAAGAAGTACTGTGATTATCGGATCAGATTTTACTGCGTCAACCTCACATTGCTTCAGGCGGTTTTGTTCCAACCGCCAACGGACATAGAGAGAGTGCAAGCCATTGCCTTTTCGTCCTTATCGGAGGGCACCATCCCACCCGAGTTCATTAGATCTGAAAAAGAAGAGCCTGCTATCACAACCTTCCATGGCTATGTCCCTCAAGTTCCCACCATTGATTTCAGCGACCCAGATGAGGCCAACCTCACAAGATTGATTGCGGTGGCCAGTATGGAGTGGGGAATTTTCCAAATTGTCAACCATGGCATTCCCTTTCATGTTATTACCAGTTTGCAGAAAGTTGGCAGGGAGTTCTTTGAGCTCTCACAGGAGGAGAAGGAACTCTATGCTAAGCCTCCGGATTCCAAGTCCATTGAAGGCTATGGAACCAAGCTTCAAAAGGAAGTGGAAGGCAAGAAAGCTTGGGTGGATCACTTGTTCCATAAAGTCTGGCCTCCTTCTGCCATTAACTACCACTTCTGGCCCAAAAACCCACCATCTTACAGGGATGCTAATGAGGAGTATACAAAGTGTTTGCGGGGAGTGGCGGACAGGCTCTTTAGCCGATTATCATTAGGATTAGGGTTGGACGAGGATGAACTGAAGAAGAGTGTGGGTGGCGATGAATTGACGTACCTTTTGAAGATCAATTATTATCCACCATGTCCTCGGCCAGACCTGGCTCTCGGGGTGGTTGCCCACACTGACATGTCCTCCATAACCATGCTCGTACCCAATGAAGTTCAGGGCCTTCAGGTTTTCAGAGATGATCATTGGTTTGATGTCAAGTATATCCCTAATGCCCTCGTCATCCACATTGGTGATCAGTTGGAGATTCTGAGCAATGGGAAATACAGGAGTGTTCTTCACAGAGCCACTGTGAATAAGGAGATGACGAGAATGTCATGGCCGGTATTCTTGGAGCCGCCACCGGAGTTGGCTATCGGCCCTCTTTCGAAGCTCATAAATGAGGAGAACCCACCAAAATACAAGGAGAAGAAGTACTGCGATTATGTGTATTGTAAGCTTAACAAGATTCCCCAGTAA 2043 0.4738 MAVERVQTIAFSSILVDTIPPEFIRSEKEQPALTTCLGCIPQVPTIDFSDPDEGNLTRLIAEASSEWAMFQIVNHGIPSEVITNLQKAGKEFFELPQEEKELYAKPPDSKSIEGYGSKLQKEVEGKKAWVDHLFHNIWPPSAINYQYWPKNPPSYRAVNEEYCKWVQPVGHRLLSLLSLGLGLEKNELKENVGGDELKYLLKINYYPPCPRPDLALGVVAHTDMSSITILVPNEVQGLQVFRDDHWFDVKYIPDALVIHIGDQLEILSNGKYKSVLHRTTVTKEITRMSWPVFLEPPSELAIGPLPKLINEKNPPKYQKKKYCDYRIRFYCVNLTLLQAVLFQPPTDIERVQAIAFSSLSEGTIPPEFIRSEKEEPAITTFHGYVPQVPTIDFSDPDEANLTRLIAVASMEWGIFQIVNHGIPFHVITSLQKVGREFFELSQEEKELYAKPPDSKSIEGYGTKLQKEVEGKKAWVDHLFHKVWPPSAINYHFWPKNPPSYRDANEEYTKCLRGVADRLFSRLSLGLGLDEDELKKSVGGDELTYLLKINYYPPCPRPDLALGVVAHTDMSSITMLVPNEVQGLQVFRDDHWFDVKYIPNALVIHIGDQLEILSNGKYRSVLHRATVNKEMTRMSWPVFLEPPPELAIGPLSKLINEENPPKYKEKKYCDYVYCKLNKIPQ* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0339 680 FunFam Flavonol synthase 346 678 - -
Vvi18g0339 680 Pfam 2OG-Fe(II) oxygenase superfamily 201 296 IPR044861 -
Vvi18g0339 680 Pfam 2OG-Fe(II) oxygenase superfamily 546 641 IPR044861 -
Vvi18g0339 680 Gene3D - 1 331 IPR027443 -
Vvi18g0339 680 Gene3D - 346 678 IPR027443 -
Vvi18g0339 680 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 541 641 IPR005123 -
Vvi18g0339 680 FunFam Flavonol synthase 1 331 - -
Vvi18g0339 680 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
Vvi18g0339 680 Pfam non-haem dioxygenase in morphine synthesis N-terminal 388 495 IPR026992 -
Vvi18g0339 680 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 150 IPR026992 -
Vvi18g0339 680 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 388 674 - -
Vvi18g0339 680 SUPERFAMILY Clavaminate synthase-like 357 678 - -
Vvi18g0339 680 SUPERFAMILY Clavaminate synthase-like 5 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0339 Vvi-Chr18 3354108 3359000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0339 387 670 Glycosyltransferase AT5G59530 33.898 1.49e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0339 K05278 - vvi:100249002 682.945