Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0338 ATGGACATGGAGAGGGTGCAAGCCATTGCCTTTTCCTTCATGACGGAGGGGCGCATCCCACCAGAGTTCATTAGATCTGAGAAGGAACAACCTGCCATCACAACCCTTCATGGGTATGACCCTCAAATCCCCACCATTGATTTCAGCGACCCAGATGAGGACAGCCTCACACGTCTCATTGCCGAGGCTAGCAGGGATTGGGGGATGTTCCAGATCGTGAACCATGGCATTCCCACTCACGTTATCAACAATTTGCAGAAAGTTGGTGAGGACTTCTTTGCCCTCCCGCAAGTGGAAAAGGAACTTTACGCCAAGCCTCCCGATTCCAAGTCTATTGAAGGCTACGGAACAAGGCTACAAAAAGAAGAGGAAGGAAAAAGAGCTTGGGTTGATCACCTCTTCCATAAGATCTGGCCTCCTTCCGCTATTAACTACCAGTTCTGGCCCAAAAATCCTCCTTCTTACAGGGATGCGAATGAGGTGTATGCCAAGTGCCTGCGAGGAGTGGCAGACAAACTGTTTAGTCGATTGTCGGTAGGGTTAGGGCTGGGAGAGAAGGAGCTTAGGGAGAGTGTAGGTGGAGATGAATTGACGTACCTTTTGAAGATTAATTATTACCCACCATGTCCTCGCCCGGATCTGGCTCTTGGCGTGGTTGCCCATACTGATATGTCAGCCATAACCATCCTTGTTCCGAATCATGTTCAGGGGCTTCAACTCTTTAGAGATGACCATTGGTTTGATGTCAAGTATATCCCTAATGCCCTTGTCATCCACATCGGCGATCAGTTGGAGATTTTGAGCAATGGCAAGTACAAGAGTGTGCTCCACAGAACAACTGTAAAAAAGGATATGACCAGAATGTCATGGCCGGTGTTCTTGGAGCCGCCGCCTGAGCTGGCTATAGGTCCTCTTCCAAAGCTCACCAGCGAAGACAATCCACCAAAATATAAGAAGAAGAGGTATTGTGATTATGTATATTGTAAGCTTAACAAGATTCCCCAGTAA 1008 0.4802 MDMERVQAIAFSFMTEGRIPPEFIRSEKEQPAITTLHGYDPQIPTIDFSDPDEDSLTRLIAEASRDWGMFQIVNHGIPTHVINNLQKVGEDFFALPQVEKELYAKPPDSKSIEGYGTRLQKEEEGKRAWVDHLFHKIWPPSAINYQFWPKNPPSYRDANEVYAKCLRGVADKLFSRLSVGLGLGEKELRESVGGDELTYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNHVQGLQLFRDDHWFDVKYIPNALVIHIGDQLEILSNGKYKSVLHRTTVKKDMTRMSWPVFLEPPPELAIGPLPKLTSEDNPPKYKKKRYCDYVYCKLNKIPQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0338 335 Pfam 2OG-Fe(II) oxygenase superfamily 201 296 IPR044861 -
Vvi18g0338 335 Gene3D - 1 333 IPR027443 -
Vvi18g0338 335 SUPERFAMILY Clavaminate synthase-like 12 333 - -
Vvi18g0338 335 FunFam Flavonol synthase 1 333 - -
Vvi18g0338 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
Vvi18g0338 335 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 43 329 - -
Vvi18g0338 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 150 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0338 Vvi-Chr18 3349227 3350587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0338 40 325 Glycosyltransferase AT5G59530 32.886 5.68e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0338 K05278 - vvi:100232939 700.279