Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0337 ATGGAATTAAAGACAGTCCAAGCCATTGCCTTTTCGTCCATGTCCGCGGGCATCATCCCTCCCGAGTTCATAAGGTCTGAGAAAGAGCAGCCTGCTATCACAACCTTTCATGGGTATATCCCGCAAGTCCCCACCATTGATCTCAGTGACCCAGATGAGGAGAAGCTCACGCGTTTGATTGTCGAGGCCAGCAGCGAGTGGGGGATGTTCCAGATTGTGAACCATGGCATTCCCAGTGACGTTATCAGCAACTTGCAGAAAGTTGGCAAGGAGTTCTTTGAGCTCCCACAAGAGGAGAAGGAACTTTATGCTAAGTCTCCTGACTCCAAGTCTATTCAAGGCTATGGAAGCAAGCTTCAAAAAGAAGTGGAGGGCAAGAAAGCTTGGGTCGATCACCTCTTCCATAACATCTGGCCTCCTCCTGCCATTGACTATCAGTTCTGGCCTAAAAAACCACCTACTTACAGAGCTGCGAACGAGGAGTATGCAAAGTGGCTGCAAGGGGTGGCAGACAAGCTGTTTGGTCGTCTGTCACTGGGGTTAGGTCTGGGAGAGGGTACGTTGAAGGAAAGCGTCGGTGGGGATGAATTGTTGTATCTTCTGAAAATAAATTATTACCCACCATGTCCTCGTCCAGACCTGGCTCTTGGGGTGGTTGCCCATACTGATATGTCCGCCATTACCATTCTTATCCCAAATGAAGTTCAGGGCTTGCAGGTTTTTAGAGACGATCATTGGTTTGATGTCAAGTACATCTCCAACGCTCTTGTCATTCATGTCGGTGACCAGTTGGAGATCTTGAGCAACGGAAAATACAAGGCGGTGCTTCACAGGACGACCGTGAACAAGGAGAAGACGAGGATGTCATGGCCGGTGTTCTTGGAGCCACCGTCTGATCAGGTGGTAGGGCCTCTTCCTCAGCTTGTCAACGAAGAGAATCCTGCTAGGTACAAGACCAAGAAATACAGTGATTATGTGTACTGTAAGCTGAACAAGATTCCACAGTAG 1008 0.4891 MELKTVQAIAFSSMSAGIIPPEFIRSEKEQPAITTFHGYIPQVPTIDLSDPDEEKLTRLIVEASSEWGMFQIVNHGIPSDVISNLQKVGKEFFELPQEEKELYAKSPDSKSIQGYGSKLQKEVEGKKAWVDHLFHNIWPPPAIDYQFWPKKPPTYRAANEEYAKWLQGVADKLFGRLSLGLGLGEGTLKESVGGDELLYLLKINYYPPCPRPDLALGVVAHTDMSAITILIPNEVQGLQVFRDDHWFDVKYISNALVIHVGDQLEILSNGKYKAVLHRTTVNKEKTRMSWPVFLEPPSDQVVGPLPQLVNEENPARYKTKKYSDYVYCKLNKIPQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0337 335 Gene3D - 2 333 IPR027443 -
Vvi18g0337 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 149 IPR026992 -
Vvi18g0337 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
Vvi18g0337 335 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 43 329 - -
Vvi18g0337 335 Pfam 2OG-Fe(II) oxygenase superfamily 201 296 IPR044861 -
Vvi18g0337 335 SUPERFAMILY Clavaminate synthase-like 13 333 - -
Vvi18g0337 335 FunFam Flavonol synthase 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0337 Vvi-Chr18 3338358 3340752 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0337 42 325 Glycosyltransferase AT5G59530 33.898 1.08e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0337 K05278 - vvi:100232938 671.774