Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0326 ATGGACGGTCAGAAAAGCCAGGCGAAGCTTACGAGAACTCAGTCCTCTTTACTCCGCTCATCTCCCACGATTCGATCCTCGATACACAGTCTCTCTTCCATCAATGAAGATGAGATGATCGCGTCCCAGGAAGAAGAGAAGAAGCCCCACAGATCCGGTTCAACACCCCGAACCGGTTCCCACCGGTTTGCTTCGGTTCTTGCGATGGCGAGCCTTACCTTCTGTACCCTTTCCTTCCTTTTCTTTTTCTTCTTCTTCTATCTCAGAAGAGAAGAAATACCCACCTCGGAAAACCTCCTATTAGCTCTGATTTTTGTTGCAATCGCGCTTTTTTTCGCCGGAAAAAACAAGGGTTTTCTTCACCACACAATCTCGATTCTCAAACATTCCTGGGACTGTAATGTTAGGAAGCTCGGGTTCTCGAAGAGTAATGCGAAGCCAGTACAGTGGTTTATCGGTGAATCGACGACGAACAAGGTGCAAAAGGCAAAGAGAATTGTGCGAGAAGGCGTGGAGTTTTACAGTAATGGTGATTTCTACGAAGGGGAGTTTCACAAAGGAAGGTGCAACGGAAGTGGGGTTTACAATTACATTGTGAATGGGAGGTATGAAGGTGATTGGATTGATGGGAGGTATGATGGGTATGGGATTGAGAGTTGGGCGCGAGGGAGTCGATATAGGGGGCAGTATCGGCAGGGTTTAAGGCATGGTTATGGGGTTTATAGGTTCTACACAGGGGATTCGTATGCCGGGGAGTGGGTAAATGGGCAGAGTCATGGTATTGGGGTTCAGACTTGTTCGGATGGAAGCTGTTATGTTGGAGAGTTCAAGTGTGGCGTCAAGCACGGCCTTGGGTGCTACCATTTTAGAAATGGAGATAGGTACGCGGGGGAATATTTTGGTGACAAAATACATGGATTTGGTGTCTACCACTTTGCTAATGGCCACTGCTACGAAGGGTCATGGCATGAAGGTCGTAAGCAAGGCTATGGTATGTATAGTTTCCGGAATGGTGACACCAGATGTGGGGAATGGGACTCTGGCACCCTTAAGAACCCTCTACCTCCACTAACTGATGCAGTCCTTCGGGCGGTTCAGGCTGCCAGAAGAACGGCAGAGAATGCAATTCATGTTCCCCGGGTGGATGAACAAGTGAACAAGGCAGTCACGGCTGCAAACAGAGCTGCAACTGCCGCTAGAGTTGCTGCTGTCAAAGCTGTTCAGAACAGGATGGACGGAAAGTTTTGCGAGACTACAGACGTCTAA 1266 0.4866 MDGQKSQAKLTRTQSSLLRSSPTIRSSIHSLSSINEDEMIASQEEEKKPHRSGSTPRTGSHRFASVLAMASLTFCTLSFLFFFFFFYLRREEIPTSENLLLALIFVAIALFFAGKNKGFLHHTISILKHSWDCNVRKLGFSKSNAKPVQWFIGESTTNKVQKAKRIVREGVEFYSNGDFYEGEFHKGRCNGSGVYNYIVNGRYEGDWIDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWVNGQSHGIGVQTCSDGSCYVGEFKCGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGSWHEGRKQGYGMYSFRNGDTRCGEWDSGTLKNPLPPLTDAVLRAVQAARRTAENAIHVPRVDEQVNKAVTAANRAATAARVAAVKAVQNRMDGKFCETTDV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0326 421 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 209 254 - -
Vvi18g0326 421 MobiDBLite consensus disorder prediction 1 58 - -
Vvi18g0326 421 MobiDBLite consensus disorder prediction 1 38 - -
Vvi18g0326 421 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 163 208 - -
Vvi18g0326 421 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 71 412 - -
Vvi18g0326 421 Gene3D - 256 300 - -
Vvi18g0326 421 Gene3D - 164 209 - -
Vvi18g0326 421 Gene3D - 210 255 - -
Vvi18g0326 421 Gene3D - 301 358 - -
Vvi18g0326 421 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 255 300 - -
Vvi18g0326 421 SMART morn 293 314 IPR003409 -
Vvi18g0326 421 SMART morn 178 199 IPR003409 -
Vvi18g0326 421 SMART morn 247 268 IPR003409 -
Vvi18g0326 421 SMART morn 270 291 IPR003409 -
Vvi18g0326 421 SMART morn 201 222 IPR003409 -
Vvi18g0326 421 SMART morn 224 245 IPR003409 -
Vvi18g0326 421 SMART morn 316 337 IPR003409 -
Vvi18g0326 421 Pfam MORN repeat 295 316 IPR003409 -
Vvi18g0326 421 Pfam MORN repeat 272 294 IPR003409 -
Vvi18g0326 421 Pfam MORN repeat 226 247 IPR003409 -
Vvi18g0326 421 Pfam MORN repeat 249 270 IPR003409 -
Vvi18g0326 421 Pfam MORN repeat 180 197 IPR003409 -
Vvi18g0326 421 Pfam MORN repeat 318 340 IPR003409 -
Vvi18g0326 421 Pfam MORN repeat 203 225 IPR003409 -
Vvi18g0326 421 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 221 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0326 Vvi-Chr18 3244652 3246769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0326 291 351 Acyl Lipid Metabolism Gene Families AT1G21980 40.984 2.24e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0326 - - vvi:100245359 790.415