Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0324 ATGGGGCATTCCAAGGACCAGTTGCTTGCGCGTTTACAGGAGCTTCAAATTGATTTCACCAAGTATGAACATCCCGCGGTTTTGACAGTTGAAGCTCAGGAGAAATATGTTGGCCATTTGGGAGGGGGATTGAGTAAAAATTTATTCTTGAAGGACAAGAAACATAGGTTTTATATTGTTTCTGCCCTGAAAGATACCAAAGTAGATCTGAAAGTTCTATCTCAGAGGCTTGGTTTGGGAAAAGGTGGCTTGAGAATGGCTCCTGAAGAAGCACTTGGAGAAATACTTCAGGTTTCACTGGGTTGTGTTACTCCGTTTGCACTAGTGAATGAATCAGCAAGACATGTCTCATTGTTCTTGGATCAAGGATTTAAGACCAAGGACTTCTGCTTCTTCCACCCACTATCTAATGACATGTCTATCGCCATTAAGGCCTGTGATCTTGACAAGTTTCTGAAGTCAATTGGCAAAGACCCCTCATATGTCGATCTGGAGGCTAACCCTACAGTAGGAAAGGATCAACCTCCTGATCTAGCTGGCCTTGTTCCATCTGATGCCATAGTCTTGCAAGATCCTCCAGAAAAATCTGTTTCCTCTGGTCCTACAGAAAAACATGCCTCCGTGGATAATAAATCATCAGTAGCTGCAGCAAAAACTGTTAAGCCATCCAATAATGTGCAAAAAGTCAAGGAGAAACCTCCTATTTCTGTGCATCAATTGAGCTCTTTTACTGATCCTGGGCACTTTGTGGAAGAAATCCTAGATAAAACGTCAGCCATAGTTCTTTCAGAGATAACGGAGGATGCAATTAAACAACATGGAGAACATCTTGGAGCTGTGTTATCAGACAGTATCAGAAAACGTCTTAGCTTGGATTTGAAGAACCTAGCTGGATCAAAACTTGAGCTGGAGAATGTGATAATATACTGCTCTTTTCAATCACGTGAGAATGGTGATGAACTGTATGCCTACTGCCCTTCCCTGAACTTGTTGAAAACCAGAGGACTGTCATTTGCCTATTCAGGAGCTCAAGATGATGAGATCTGTTATCTCCAAGGAGCATTCAAATTAGATTTCCAATTGTCTTTTGCAAGATAA 1098 0.4171 MGHSKDQLLARLQELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIVSALKDTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFLDQGFKTKDFCFFHPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAGLVPSDAIVLQDPPEKSVSSGPTEKHASVDNKSSVAAAKTVKPSNNVQKVKEKPPISVHQLSSFTDPGHFVEEILDKTSAIVLSEITEDAIKQHGEHLGAVLSDSIRKRLSLDLKNLAGSKLELENVIIYCSFQSRENGDELYAYCPSLNLLKTRGLSFAYSGAQDDEICYLQGAFKLDFQLSFAR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0324 365 MobiDBLite consensus disorder prediction 195 228 - -
Vvi18g0324 365 Gene3D - 1 171 IPR036754 GO:0002161
Vvi18g0324 365 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 297 IPR040285 -
Vvi18g0324 365 SUPERFAMILY YbaK/ProRS associated domain 4 164 IPR036754 GO:0002161
Vvi18g0324 365 CDD PrdX_deacylase 5 162 - -
Vvi18g0324 365 Pfam Aminoacyl-tRNA editing domain 24 151 IPR007214 GO:0002161
Vvi18g0324 365 MobiDBLite consensus disorder prediction 191 228 - -
Vvi18g0324 365 FunFam Putative prolyl-tRNA synthetase 1 169 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0324 - - vvi:100252259 585.874