Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0322 ATGGTCAACCACAGCCGCCGTCGCCGCCCACTGCTCCCAATCATCGGTCTCCTGCTCTTACTCTTACTCTCATCCATCTCCGCAACACCATCCCACCAGCATCACCTGGAAAAAGAAGAAGAAGACTCACCTATAACTCGGTTTCAAGGCTACCTCAGAATTAACACAGTACACCCGAACCCCGACTACGCCTCCGCCGTCTCCTTCCTCAAATCCCAAGCTCTCTACATTGGCCTCCAAACTAAAACCCTGGAATTTGCCCGATCGAAGCCACTTCTCCTCCTGACATGGCCAGGCTCCGACCCCTCTCTGCCCTCCATCCTCCTCAATTCCCACCTCGACTCTGTCCCTGTCGAGCCATCCAAGTGGCTCCACCCTCCCTTTTCGGCATACCGCTCTCCCGATGGAAAAATCTTCGCCCGCGGCTCCCAAGACGATAAATGCATAGCTATGCAGTACCTCGAAGCAATTCGGAACCTCAGAGCCCAGAACTTCCAACCCACTCGCACGATTCACATTTCCTACGTTCCCGATGAGGAGATTGGCGGGTTCGATGGTGCAGCGAAGTTTGTTGCGTCGAAAGAGTTTGCGGATTTGAATGTGGGGTTTATGTTAGATGAAGGGCAGGCATCGACGGGCGATGAATTTAGGGTTTTTTATGCGGATCGGTCGCCTTGGAATTTGATAATTAAGGCTTTTGGGATGCCTGGACACGGATCAAGGTTGTATGATAATAGTGCAATGGAGAATTTGATGAAGAGTGTTGAGATTATCACTAAGTTCAGGGAAAGTCTTTTTGATGTGGTTAAGGCTGGTAAGGCCGCGAATTCAGAAGTTATTTCAGTTAATCCAGTGTATTTGAAGGCTGGGATTCCATCCCCCACTGGATTTGTGATGAACATGCAACCTTCCGAGGCGGAGGCCGGATTTGATCTTCGCATGCCACCAACAGCAGACCCGGATCTTGTGAAGATAAGAATTGCTGAAGAATGGGCACCAGCTATCAGAAATATGACGTACCAGATAATTGAGAAAGGACCCATCAGAGACTACATGGGGCGCCCTTTAATGACACTGACCAATGACTCCAACCCGTGGTGGTCTATCTTCAAGCAAGCTATAACTGAAGCAGGAGGAAAACTCGCAAAGCCTGAAATCTTAGCTTCAACTACAGATGCACGATATATGAGACAGATGGGCATTCCCACTCTTGGTTTCTCCCCAATGACAAATACTCCTATCTTGCTTCATGACCATAATGAGTTCCTGAAAGATACCATTTATTTGAGGGGAATTAAGGTTTATGAATCCGTAATTAGTTCTTTAAGTTCCTTTGTGAGAGCTTCTGCCTAA 1353 0.4826 MVNHSRRRRPLLPIIGLLLLLLLSSISATPSHQHHLEKEEEDSPITRFQGYLRINTVHPNPDYASAVSFLKSQALYIGLQTKTLEFARSKPLLLLTWPGSDPSLPSILLNSHLDSVPVEPSKWLHPPFSAYRSPDGKIFARGSQDDKCIAMQYLEAIRNLRAQNFQPTRTIHISYVPDEEIGGFDGAAKFVASKEFADLNVGFMLDEGQASTGDEFRVFYADRSPWNLIIKAFGMPGHGSRLYDNSAMENLMKSVEIITKFRESLFDVVKAGKAANSEVISVNPVYLKAGIPSPTGFVMNMQPSEAEAGFDLRMPPTADPDLVKIRIAEEWAPAIRNMTYQIIEKGPIRDYMGRPLMTLTNDSNPWWSIFKQAITEAGGKLAKPEILASTTDARYMRQMGIPTLGFSPMTNTPILLHDHNEFLKDTIYLRGIKVYESVISSLSSFVRASA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0322 450 Gene3D - 364 445 - -
Vvi18g0322 450 SUPERFAMILY Zn-dependent exopeptidases 41 443 - -
Vvi18g0322 450 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 38 445 IPR010159 GO:0004046|GO:0005737|GO:0006520
Vvi18g0322 450 FunFam Aminoacylase 1 36 227 - -
Vvi18g0322 450 FunFam Aminoacylase-1, putative 364 445 - -
Vvi18g0322 450 FunFam aminoacylase-1 isoform X1 227 338 - -
Vvi18g0322 450 PANTHER AMINOACYLASE-1 29 446 - -
Vvi18g0322 450 Pfam Peptidase family M20/M25/M40 108 440 IPR002933 GO:0016787
Vvi18g0322 450 Gene3D Zn peptidases 35 226 - -
Vvi18g0322 450 Gene3D - 227 338 - -
Vvi18g0322 450 PIRSF ACY-1 34 447 - -
Vvi18g0322 450 CDD M20_AcylaseI_like 41 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0322 Vvi-Chr18 3209234 3213914 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0322 K14677 - vvi:100257526 868.996