Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0315 ATGGTTTTATGGGTATTCGGGTATGGGTCACTGATATGGAAAGCAGGGTTTGAATATGATGATCGACGAGTTTGTTTCATCAAAGGGTACCGTCGTGTCTTCTACCAAGGTAGTACAGACCACAGAGGGACACCAGAATACCCAGGAAGAACAGTTACATTGGAGCCTGCTGAAGGAGAGATCTGCTGGGGAGTTGCCTACAAGGTTTCCAAGGAGGAAGATGAACAGATTGCATTAACATATCTAGAAGTGAGGGAGAAACAGTATGACAAGAAGGCTTATCTTGATGTTTATGCTGAGCCAATGGCTACTACTCCTGTCATCTCTGGAGTAATGGTATACATAGCATCCCCAGACAAGAAACTTAATCGTAACTACCTTGGCCCTGCATCAGTTGAAGAGATTGCCAAACAAATTATTCATGCTGAAGGCCCCTCAGGTCCTAACAGAGAATATCTTTTCCAACTTGAACAAGCACTCCTTCAAATGGGATGTGAAGACAAACATGTAATGGATCTCGCGAATGAAGTGAGGCGCATCCTTTCAGAGAAGGAGCTGACTGTTTCATGA 570 0.4404 MVLWVFGYGSLIWKAGFEYDDRRVCFIKGYRRVFYQGSTDHRGTPEYPGRTVTLEPAEGEICWGVAYKVSKEEDEQIALTYLEVREKQYDKKAYLDVYAEPMATTPVISGVMVYIASPDKKLNRNYLGPASVEEIAKQIIHAEGPSGPNREYLFQLEQALLQMGCEDKHVMDLANEVRRILSEKELTVS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0315 189 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 93 IPR036568 -
Vvi18g0315 189 Pfam ChaC-like protein 3 179 IPR006840 GO:0006751|GO:0061928
Vvi18g0315 189 Gene3D - 2 187 - -
Vvi18g0315 189 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 185 IPR006840 GO:0006751|GO:0061928
Vvi18g0315 189 CDD GGCT_like 5 116 IPR013024 -
Vvi18g0315 189 FunFam Gamma-glutamylcyclotransferase 2 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0315 Vvi-Chr18 3170610 3174924 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0315 K22596 - vvi:100264430 388.652