Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0314 ATGATTATGTTGGTTGTTTCTGGTTGCAGTTCTTTGACATTTGAGGGGGTTAGGAGATTATTAGAGAAGGACTTGGGGTTGGAGACATATGCATTGGATGTGCACAAGAGATTTGTCAAGCAATTTTTGCTGGAGTGCATAAATGCTGCTGCTGATGACAATCCTTCCAAGAAATCTGGGGAAACCAGGGGAAAAAATGTCTGTTCAACTAAAGGTGAAGCTGCAGAGCCACCTGAAACAGTTAAGTCAAAGAAAGATGTGAAGGAACCTAGCTCTGGAGATGAGGAGAAAATAGAAGGTTCTCCAGTACTAGGTCTAATGACAGGCCAGAAAATAGCCAAATCTGAAACCGAGGAAACTCAAGGCAAGGAAAATAAAGAAGTTCCCAGTGAAAGCACAATAAGGAAGGCCATTAGAAAAAGAGCATCTTACTTCAAAGCTAAGTCTGAGAACATTACTATGGCTGGAGTTCGTCGAGTTTTGGAGGAAGACCTTAAACTAGATAAAAAGACTCTTGATCCATATAAGAAATTTATAAGTGAGCAATTAGATGAGGTATTAAAATCTCCTCAAGTTTCTAAACCTACTACTGGGGTTAAGAAGGGCAGTCCTAAGAAAAATTCTCATAGCCGGGCATCAAGGAAGACAAGCAGTGAAGGAAGTTCTGAGTCTTTAGAGAGCGAGAGTGATGAGGAAGAAGTAAAACCTAAAACAAAAATGGCTCCAAAGGGAAAAACCCAGAATTCTGAAGATCTAAGAAAACGCAAAAGACCTGTGACGGAAACAAAGATGCCTAGCAAGAAGCGAAGCAAGACTGCAGAAACAGTATCAGAGGATAATAGTGATGCAGAAGACAGTGGAAATGTTTCTGATGATGGTCACTCACAATCATCCTCTGAAAAACCTGTCAAGAGGAAAGAAGTTTCGGCTCCTGCATATGGAAAACGTGTTGAGAATCTGAAATCAATTATCAAATCGTGTGCAATGAGTGTTCCCCCATCAGTTTACAAGAGAGTCAAGCAGGCACCTGAAAACAAACGCGAGGCCCACCTAATAAAGGAACTCGAAGAGATACTATCAAAAGAAGGATTATCTAAAAATCCTTCTGAAAAAGATATCAAGGAGGTCAGAAAGAAAAAGGAGAGAGCTAAAGAACTGGAGGGCATTGATACAAGCAACATTGTCTTAAGTTCGCGCAGAAGGTCCACAAGGAGTTTTGTAGCTCCTCCAAAGCCCAAAATACCAGATGAAAGTGAGAGTGAAGATGCTGAAGATACTGATGACGACGACGACGATGATGATGATGACGAGGAAGAGGAGGAGGTTGAGGATGAAGAAGATGATGGTGGAGAGGATGATGATGCCAGCCAGAGTGAAGAGCTTAATGAAGATAATGCTGGGGACAGCGATTGA 1413 0.4154 MIMLVVSGCSSLTFEGVRRLLEKDLGLETYALDVHKRFVKQFLLECINAAADDNPSKKSGETRGKNVCSTKGEAAEPPETVKSKKDVKEPSSGDEEKIEGSPVLGLMTGQKIAKSETEETQGKENKEVPSESTIRKAIRKRASYFKAKSENITMAGVRRVLEEDLKLDKKTLDPYKKFISEQLDEVLKSPQVSKPTTGVKKGSPKKNSHSRASRKTSSEGSSESLESESDEEEVKPKTKMAPKGKTQNSEDLRKRKRPVTETKMPSKKRSKTAETVSEDNSDAEDSGNVSDDGHSQSSSEKPVKRKEVSAPAYGKRVENLKSIIKSCAMSVPPSVYKRVKQAPENKREAHLIKELEEILSKEGLSKNPSEKDIKEVRKKKERAKELEGIDTSNIVLSSRRRSTRSFVAPPKPKIPDESESEDAEDTDDDDDDDDDDEEEEEVEDEEDDGGEDDDASQSEELNEDNAGDSD* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0314 470 MobiDBLite consensus disorder prediction 230 278 - -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 297 312 - -
Vvi18g0314 470 SMART CHZ_2 380 415 IPR019098 -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 419 470 - -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 77 96 - -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 186 203 - -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 183 314 - -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 360 470 - -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 116 134 - -
Vvi18g0314 470 PANTHER HIRA-INTERACTING PROTEIN 3 11 470 IPR037647 -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 360 388 - -
Vvi18g0314 470 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 128 188 IPR014876 -
Vvi18g0314 470 Pfam Histone chaperone domain CHZ 381 413 IPR019098 -
Vvi18g0314 470 MobiDBLite consensus disorder prediction 53 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0314 12 414 EF-hand Containing Proteins AT1G44780 46.173 2.77e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0314 - - vvi:100259114 757.288