Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0309 ATGGACTGTTCGGCCGAGCAAGAAAAGCCGGTTGTCGAGGACAATGGCGGTGATTTAGGGTCGCCGGAATTGCGAACTGTTCGCCGGAGGTTGATTCAGAAGACGCTGTTCCCGCACAGGTCTCAAGGTGCGGAGGAGCACATCGACGGAAGAGAAGAAAAAGATTGTGGTGCAGATGAAGAAGAGGATCAGACCGAGGAGTATTGCGGGAGTCAGGGCAAGAAGAAGAAGAGACCAAAGAGAAAGGCAATGTCTCGACCTAGAGCTTCTAAAAAGGCTTCTGAAAATGACAAAGAGGCTCTGAGCATGAGGGTAGATGACAAAGATTCCCCAGTTGCTGATGGGTCTGATTTCTTTGTAAAAGTTTCTTCGAGGCGACTGCAGAAAAAGAAGCAATGCATCAACTCAGATGAAGGAAATGATGATACCTGTTCACCTTCAAAACATGTGCCTAATATGCGAAGCCGTCAATGGTTGAAGTGGCAGGCAAATACTACTCCAATTAAAAATGTAACAATCAATGGCCTGAAAAGGCCATGCACGAGGCAAATATCAACTGATTCAGTACAGAGTGAACCTGCAACACAGCCAATTCCAGATTTGCGGTTAGAGGCAAAAATGACAGCTGAGGAAAATTCAAGAATGTTTGCGGGGAGGCAATTACATCCGTTTTTCTCATCATGGAAAGTGGGTAAGAGATGCAATGAGACAACTGACCCAGAGAACATGGGGTGCTTGATTGAGAAAAAGAATAAAAGCATTACTTTTGGTCCTATTCATGTGTTTGAAAGGATTCAGGATGATGATGTGTCAGTGGATTGGAAAAATTGGATATTTTGTGAAAGATCCATTGTCAAAGCCAGTTGTGCTCCAGAAAGTGCTTCCTCATCAGTATTTGAAGGCTCTGCAGAATCCTTAGATTTTGATAACTTTCTTAATGTTCCACATTCCATAGGAGCATCATATTTTCAGAGTGAGGAGTCTCTGGATCAACGTCCTATTCAGCAAAATTTGCATGAAATATCAGCACCATGCTCTACCATGTCAGCTAATGAGCAAGTGCCATACCATCAGCTATCAAAAAACATGGAAGGGAACCAAGAAGGAAACCATATTGGATTCTTCACTGGGGATTCTGGTTGTGGGAGGAACATAGATGCTATGCCGCCCAGTAGGCTTCTGCAGGAGAGTATGATGCCATACTATCTTGGTTGTGGCAATCAGCCAGAGGATAGCTTGTGGATAAATAAGTACCAGCCAGAAAAGGCCATAGAGGTGTGTGGCAATGGTGAATCTGTAAAGCTTTTGAGCGAGTGGCTACATCTTTGGCATGAAAAGGATTCGCAATCCAGCAAAAAGGCCACTGGTGGTGATAAATGCATCATGCAAGATTCTGATAATAGCTTTTATGGAAGTGATTCTGACTCAGACTTGGATGAAGGCACTGGCCTAAAGAATGTTCTGTTAGTTACTGGACCAGTTGGGAGTGGGAAGTCTGCAGCCATATATGCATGTGCTAAGGAGCAAGGTTTTCGTATTATCGAGATCAATACATCAGGTTTGCGAAGTGGAACTGTTGTGAAGCAAAGAATTGGGGAAGCTTTAGAATCACATGGGCTAAAACGGTCACTTGAAAATCCCATAGGTTCACAGAGCAAGCATATTATGAAATCTTTCCCGGCTCTACCCAATGGTACAGCAACACAGGAGTTTGAAAGTAAGGTAATTGAACTGATACCCTCTTCAGATGAGGAAGATTCCCATGATGACATTGGGACACCTGAGAAACATATACACAAGAAGAATAGAACTGCTTGTGATCGAGGTGAAACCATAACTTTAATTCTCTTTGAAGATGTGGACATCACTTTTCCTGAAGATCGTGGTCTTATTGCTGCAATACAACAACTTGCTGAAACAGCAAAGCGTCCCATCATACTGACCAGCAATAGCAACAATCCTGTTCTGCCAGACAATTTGGACAGGTTAGAGGTGTGTTTTACACTACCATCGCTGAAAGAGCTACTATGTCACGCATATATGGTTTGTGCTGCAGAGAAAACCAACATTCAACCTTGGTTAATAGAGCGATTTATTGAATATTGTCAGGGAGATATTCGGAAAACCTTGATGCATCTTCAGTTCTGGTGTCAGGGGAAAAGATATAGACAAGATAGGAAAGCACATAAAATATATGGTCCTCTGTCATTTGATCTTGATGCTGGGCACCAGATACTACCCAAGATAATCCCTTGGGATTTCCCTTCTCAATTATCTGAGCTAGTGGAGAAAGAGATTGCCAAGTCATTGTCCAAGATGGAAGGAGACTCTAGCTCAATGGAGGTAATTAAGGAAGAAGGTCTCCACAATAAGGAAATGCAGAATGGCTTGGAGATGCATGATTATGAAAAAGACAGTATTGAAGCCAAGAAAGAAGCAATGTTCAGCAGGAACTGTTCTGTTCTTGATGGCAACGGCTTTGCGGCTGAGTTTGATATTGGTTGTGAGCTTTCCAATTCCTCAGGCTCCCCTGCCACTTTCACTCGGCGAAATGTTCGGAGAAAACTTGATACAATACTGTCCTCCAATTCAGAAGATGAGGTTTTTAGTGACTGTTTTCCTGTAGTATCACATAATTTACTCGATGGTACTGACAGTGGAGTATTCCTTGACATTGATAGCAAGATTCCTCATTGTCAGGAATCTAATAACTGCTTAAATCCATTTACTGACCAGCTACTTCATTCTGAAGAGGGGAAATTTGAGGAAAATCGTTACCAATGTTCAGAAACAGCAAACAGTCTATGCATCTATGACACTTGCAAATCATTTGACATATCACAAGTGCCAGAATCATCATTTGTTCCTGAGACTGAAATGAGTGATGGAACAGAGTTGCTATCTGTAGCATTATCATGTGGTCGTGTTGCTGATATTGCAGAAACAGTTTCTATTTGCAATGACTTAACGCAGAATCTGTTACAAGTTGAGGCTAAGAATCCAGAGAAATCTGTACCTGGATTAAGTCAAAATTTAGAAACGATGATAAATGGAGACTCAGTTAATGAAGAGGTGGGAGATTCTCAAAATGAACATGTGGAATCTGTCACAAGAGAGTATCCAGTAATGGATGAATGTAGCCGCATGGCTTTCACCAGAGGATCCAAGTCCTTGGAGGATCCCAGATCCTGGATGGTGACTAATTCAGTACAAGAAACATGGAGAAAACTTTGTGGTTGTCACACAGATCTAAGACGGTATGCTATCTTAGAACAGAGAGACGCTTCTCAAATTGTAGAACTAACTTATAAAATGAGCAATCTCATCTCAGAAGCTGATCAGTTGCGGTATAACTGTCATCCCTTAGATAGTGATTCTTTAGATCTGTCTACAGTTCCTTGTGGGGAAGAATCTCATGCATTCAGTTGGTATGATGAGCAATTACAGATGGCATCCACAATTGCACAACATGGATTTTGTTTCTATTCCAAATATATTGCTGCTGCAGGATCAATCTTGGGCTCAGACTACACGGTGGATTTGGCCTCTGAGATGCTGGCTTCCACAACTAATACCATGGCATTAGGAAAATTAACTAGACCAGAAATGAGAATGAATTGGACTTCTAGAAAGGGTGTACAGATGGAAGTGCCAAAAAGTGACATTTCCTTGAGAAGTGAAACAGAGCCATGTCTTTGCAATATAGTTCAGTCTGTAGTTCCTTCAAAATCATACTTGGGAGTGAAAGGTCATGCATTCCATGAATATCTTTCCTCACTGAGCCAGATTTCAAGATCAGAAGCTTCCCGTTTATCAGAAAACATTAACCAGAATAAACGGAGGAGGGCACGGGCTAGTCGGCACTACTTGAGTACTGGTGCTTGCATGTTGTCTCCTGATGATATTTCATTGCTGTGTCAATCTAATTGCTATGGCACGGATTCATCCAAACAACAGATGCAGGACTGA 3969 0.4203 MDCSAEQEKPVVEDNGGDLGSPELRTVRRRLIQKTLFPHRSQGAEEHIDGREEKDCGADEEEDQTEEYCGSQGKKKKRPKRKAMSRPRASKKASENDKEALSMRVDDKDSPVADGSDFFVKVSSRRLQKKKQCINSDEGNDDTCSPSKHVPNMRSRQWLKWQANTTPIKNVTINGLKRPCTRQISTDSVQSEPATQPIPDLRLEAKMTAEENSRMFAGRQLHPFFSSWKVGKRCNETTDPENMGCLIEKKNKSITFGPIHVFERIQDDDVSVDWKNWIFCERSIVKASCAPESASSSVFEGSAESLDFDNFLNVPHSIGASYFQSEESLDQRPIQQNLHEISAPCSTMSANEQVPYHQLSKNMEGNQEGNHIGFFTGDSGCGRNIDAMPPSRLLQESMMPYYLGCGNQPEDSLWINKYQPEKAIEVCGNGESVKLLSEWLHLWHEKDSQSSKKATGGDKCIMQDSDNSFYGSDSDSDLDEGTGLKNVLLVTGPVGSGKSAAIYACAKEQGFRIIEINTSGLRSGTVVKQRIGEALESHGLKRSLENPIGSQSKHIMKSFPALPNGTATQEFESKVIELIPSSDEEDSHDDIGTPEKHIHKKNRTACDRGETITLILFEDVDITFPEDRGLIAAIQQLAETAKRPIILTSNSNNPVLPDNLDRLEVCFTLPSLKELLCHAYMVCAAEKTNIQPWLIERFIEYCQGDIRKTLMHLQFWCQGKRYRQDRKAHKIYGPLSFDLDAGHQILPKIIPWDFPSQLSELVEKEIAKSLSKMEGDSSSMEVIKEEGLHNKEMQNGLEMHDYEKDSIEAKKEAMFSRNCSVLDGNGFAAEFDIGCELSNSSGSPATFTRRNVRRKLDTILSSNSEDEVFSDCFPVVSHNLLDGTDSGVFLDIDSKIPHCQESNNCLNPFTDQLLHSEEGKFEENRYQCSETANSLCIYDTCKSFDISQVPESSFVPETEMSDGTELLSVALSCGRVADIAETVSICNDLTQNLLQVEAKNPEKSVPGLSQNLETMINGDSVNEEVGDSQNEHVESVTREYPVMDECSRMAFTRGSKSLEDPRSWMVTNSVQETWRKLCGCHTDLRRYAILEQRDASQIVELTYKMSNLISEADQLRYNCHPLDSDSLDLSTVPCGEESHAFSWYDEQLQMASTIAQHGFCFYSKYIAAAGSILGSDYTVDLASEMLASTTNTMALGKLTRPEMRMNWTSRKGVQMEVPKSDISLRSETEPCLCNIVQSVVPSKSYLGVKGHAFHEYLSSLSQISRSEASRLSENINQNKRRRARASRHYLSTGACMLSPDDISLLCQSNCYGTDSSKQQMQD* 1323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0309 1322 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 8 1318 IPR004582 GO:0006281
Vvi18g0309 1322 Gene3D - 670 731 - -
Vvi18g0309 1322 Pfam ATPase family associated with various cellular activities (AAA) 488 668 IPR003959 GO:0005524|GO:0016887
Vvi18g0309 1322 MobiDBLite consensus disorder prediction 1 114 - -
Vvi18g0309 1322 Gene3D - 411 667 IPR027417 -
Vvi18g0309 1322 MobiDBLite consensus disorder prediction 88 114 - -
Vvi18g0309 1322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 722 IPR027417 -
Vvi18g0309 1322 MobiDBLite consensus disorder prediction 40 54 - -
Vvi18g0309 1322 MobiDBLite consensus disorder prediction 129 150 - -
Vvi18g0309 1322 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 672 733 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0309 - - vvi:104882466 2677.12