Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0308 ATGCCAAGTTCAGGTTCATTTTTGAGGCAACTGAGTGGGAAAGAGGCTTGGAAATCATCATCAAAGAGATGGGGTGGAAATAATAGCAGGCATGGTGATGGAGGGTGTGAGAGAAGTTTGAAACAAATGGAAGGGCTTCACATGTATGGTGGTGAGAATGGCGGGTTGGTGATGAGGAAGAGAGTGATGGTGGTGGTGGATCATACTTCAAATTCCAAGCATGCAATGATGTGGGCACTAACACATGTCACCAACAAGGGGGATATCCTGACTCTCCTTCACATCATTCCTCCCTCCCATAAGGGCTCTGAGAGGCCAACTGAGTCTTCTTCTTCTCCTTACCTTGCTAACTCACTCGGGTCCCTTTGCAAGGCTTGTAAACCCGAGGTGGAAGTGGAGGCATTGGTAATCCAAGGGCCAAGGCTGGCCACAGTGGTAAGCCAAGTGAAGAAGCTAGAGGTGTCTGTGCTAGTGCTGGGTCAGAAGAAGCCCTCTCCACTCATCAATTGTTTATGTGGAGCCAGCAGCACCCAGGGGTTTGTGGAGCAGTGCATCAACAACGCAGAGTGCTTGACCATTGGAGTCAGGAAACAGAGCAAAGACATGGGTGGCTACCTCATCAGCACCAGGTGGCAGAAGAACTTCTGGCTCTTGGCATAG 660 0.5 MPSSGSFLRQLSGKEAWKSSSKRWGGNNSRHGDGGCERSLKQMEGLHMYGGENGGLVMRKRVMVVVDHTSNSKHAMMWALTHVTNKGDILTLLHIIPPSHKGSERPTESSSSPYLANSLGSLCKACKPEVEVEALVIQGPRLATVVSQVKKLEVSVLVLGQKKPSPLINCLCGASSTQGFVEQCINNAECLTIGVRKQSKDMGGYLISTRWQKNFWLLA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0308 219 Pfam Universal stress protein family 58 190 IPR006016 -
Vvi18g0308 219 MobiDBLite consensus disorder prediction 1 38 - -
Vvi18g0308 219 MobiDBLite consensus disorder prediction 1 27 - -
Vvi18g0308 219 Gene3D HUPs 56 203 IPR014729 -
Vvi18g0308 219 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 58 174 - -
Vvi18g0308 219 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 219 - -
Vvi18g0308 219 CDD USP_Like 67 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0308 Vvi-Chr18 3064575 3065829 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0308 - - vvi:100248801 448.743