Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0307 ATGGAGGAGAGTCTTCTTTGCCAGTGGAGCGCGTTTAGATCTCTGCTTGCCATCCTTCAATGGTGGGGGTTCAATGTCACCGTGATTATCATGAACAAGTGGATCTTTCAGAAACTGGATTTCAAATTTCCTCTGTCAGTGTCATGTATTCACTTCATATGCTCTGCTATTGGAGCCTATCTAGTAATCAAGGTACTGAAGCTTAAGCCACTGATAGTGGTTGACCCTGAAGATCGCTGGAGACGGATATTTCCCATGTCATTTGTATTCTGTATTAACATAGTGTTGGGGAACGTGAGTTTGCGTTACATTCCAGTTTCTTTTATGCAGACTATAAAGTCATTCACTCCTGCAACAACAGTTGTTTTGCAGTGGATGGTTTGGAGAAAATACTTTGAATGGCGAATTTGGGCTTCTTTGGTACCCATTGTTGGAGGAATTCTTCTTACATCTGTCACAGAGCTCAGCTTTAATATGTTTGGATTTTGTGCTGCCTTATTTGGCTGTCTGGCTACTTCCACAAAGACCATACTTGCGGAGTCTTTGTTGCATGGATATAAATTTGATAGCATAAACACAGTGTACTACATGGCACCTTTTGCAACCATGATCTTGGCAGTGCCAGCTATGGTACTTGAAGGTCCTGGTGTTATAGATTGGTTTCAAACTCACGAGTCTATTGGTCCGGCCCTCATCATCATTTTCAGTTCTGGGGTTTTGGCTTTCTGCCTCAACTTCTCCATCTTCTATGTGATTCACTCAACAACTGCTGTCACATTTAATGTTGCTGGAAATCTTAAGGTTGCAGTTGCTGTCATGGTTTCATGGCTTATATTCAGAAATCCAATCTCAGCTATAAACGCAGTTGGATGCTCAGTGACACTCGTGGGCTGCACATTCTATGGATATGTGAGGCACAAGCTCTCCCAACAGCCTCCAGGGACTCCTAGGACACCCCGGACACCACGGAGCAGGATGGAGCTGCTCCCCCTTGTAAACGATAAACTAGATGATAAGGTCTGA 1023 0.437 MEESLLCQWSAFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCIHFICSAIGAYLVIKVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWMVWRKYFEWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILAVPAMVLEGPGVIDWFQTHESIGPALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVMVSWLIFRNPISAINAVGCSVTLVGCTFYGYVRHKLSQQPPGTPRTPRTPRSRMELLPLVNDKLDDKV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0307 340 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Vvi18g0307 340 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Vvi18g0307 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 62 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0307 Vvi-Chr18 3057786 3063692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0307 1 340 Organic Solute Cotransporters AT1G77610 88.856 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0307 K15285 - vvi:100243662 664.455