Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0304 ATGGTCTGCTCTTGCAACCTCTCAAAGAGGACTTCCACCTCTTCCAAACTATTTGAAAATGATGAGGCTCATATCAGATTAGCTGCTGCAAAATCTGTTCTTCGACTTGCTGGAAGATGGGATTTGCATATTTCTCCCCATATCTTTCGCTCTACAATTCTAGTGGCAAAGGATCCTTCACCACTTATAAGGAGACTATTTCTTGACAAGACTCACAAGCTGTTGAAGGAACATGCTATACCTAGTAGATATGCATGTGCTTTTGCATTTGCTGGCCCGGATTGCCCCAAAGATCTGCAAGAGGATTCATTGAAATATATGGCAGAATTTATGAAAGAATACCGTAAAGAAGCTCAAGTACGCCAAACTTCTGTGATGCAAGGAGGAACCATTACCGATTACCCAGCATACATGGTGGTATTCTTGGTCCATGTTCTTGCTCATGATACTAATTTCCCATCTGAAACTTGTCAAGACGAAGAAATGTTTGCTCAGTTTTGCAGTCCCCTTTTCTTCGCCTTGCAAGTGTTAGTCAATGCTAGTTTTGTTGATGGTGGCATGGATCTTGACAATGACGCTATCTCATGTATATTTAGTATTTTCCGTGCTATTAAAAGGGCTGATGATGCTGTTGATGCTCAGAGAACTCTTGTTGATTCAACAAGACTTATTGGGTCTACTTTTGATGAAAAATTTCTTAAGAAGCTTATTCCTATTTTTAAATCTAATCTCTCTCTGCCTAGTACTGCGCATCCTAAACGTGGTCGAAAATGTCAGGACAGTTCACATTTAGATATTATAAAGAGCAACACTTTGAACCTGGCACCAAGTAGGGAAGTTGCATCATCAAAAAATGGGACAATAATAGGCCAGAGTTCATCCTTACATAGAAAGACTCAAAAAACTGTGATGCAGGAAATCAGTACTGGAGGAAGGCGAAAGCATCCTGTGTCTCCCACTGCTCACAAATCAGTTGGATTGCACAATGAATGTTGCATTAATAATGGGCACAAAAGTGATAAAGGCCGAAAATCTGAACCAAGTTTGGGGCAAGGGCAACTTTCATCTTCTTGTGGCTCTGCAACAATGAGACCTTTGACTGAGTCACAAATTTCCACCAAGAAGATGGTTTTACCACATGCAGCTTCTTTAAAAGCAAATGGCACAGCAAAAGAAAGTAGCAACATTACTACGAAACCTTCAAAATCTTCCAGATCCAAGCGTAAAGATCCTTGTAGTTCAGTGGAAATTATAAACAACAGTGAGGTATTGATTGGACAACGGATCAAATTGTGGTCTCCTGTTGATAAATGTTTCTATTCAGTCACTGTGGATGGGTTTAATTCTCAGAACAATACTCACAAGGTGGTATATGACAATGGTGCAATTGAAGCATTATGCTTGGCAAGTGAGAATTGGGAAACTATAAGTGATGGTTCCTTGTCAAAGACGGTTAAATTGGCACAGGAGACAAATGGTTTCCATATGCAGAAGTGTGATCCTCTGGAGATTTCTTCTCTCAGTAGTCTGAAGGAAACTGTTGATGCAGTTGGAGATGATGCATCCCAACAGCACGAAAATTTTCAAAATAAAGGGAGGACAAATTCACTTTATATGACAAATCCTGGTTCTGTAAAGGGAAAGCATGGCCAGAAGGTTTCTGTTGACACATTGGCATCAGAAGTTGTCAATATGAACGAGATTGCTGTAGGTAGAAGGACCCGGAGAAGGAAAACTTAA 1740 0.4011 MVCSCNLSKRTSTSSKLFENDEAHIRLAAAKSVLRLAGRWDLHISPHIFRSTILVAKDPSPLIRRLFLDKTHKLLKEHAIPSRYACAFAFAGPDCPKDLQEDSLKYMAEFMKEYRKEAQVRQTSVMQGGTITDYPAYMVVFLVHVLAHDTNFPSETCQDEEMFAQFCSPLFFALQVLVNASFVDGGMDLDNDAISCIFSIFRAIKRADDAVDAQRTLVDSTRLIGSTFDEKFLKKLIPIFKSNLSLPSTAHPKRGRKCQDSSHLDIIKSNTLNLAPSREVASSKNGTIIGQSSSLHRKTQKTVMQEISTGGRRKHPVSPTAHKSVGLHNECCINNGHKSDKGRKSEPSLGQGQLSSSCGSATMRPLTESQISTKKMVLPHAASLKANGTAKESSNITTKPSKSSRSKRKDPCSSVEIINNSEVLIGQRIKLWSPVDKCFYSVTVDGFNSQNNTHKVVYDNGAIEALCLASENWETISDGSLSKTVKLAQETNGFHMQKCDPLEISSLSSLKETVDAVGDDASQQHENFQNKGRTNSLYMTNPGSVKGKHGQKVSVDTLASEVVNMNEIAVGRRTRRRKT* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0304 579 MobiDBLite consensus disorder prediction 283 307 - -
Vvi18g0304 579 MobiDBLite consensus disorder prediction 387 401 - -
Vvi18g0304 579 CDD Tudor_Agenet_AtEML-like 425 474 - -
Vvi18g0304 579 MobiDBLite consensus disorder prediction 283 412 - -
Vvi18g0304 579 MobiDBLite consensus disorder prediction 346 376 - -
Vvi18g0304 579 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 16 505 IPR039776 GO:0007064
Vvi18g0304 579 Pfam Sister chromatid cohesion protein PDS5 protein 15 216 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0304 K11267 - vvi:100255781 1067.37