Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0299 ATGTCCTTTATTGCAGAACCTGCACTTCATTTGTTAAATTATTATTGTTTCACAGACATGAATAAGCCTTCTCCCAGCACCACCAGACTTGCCACTTCTCTCTGCTGTATTTGCGTGCTTTTATCTTTTACTACCACAGTGATCAACCCTGTTGTTGCTTTGGAAAATTGCAAATTTCCAGCAATCTTTAACTTAGGAGCCTCCAGTTCAGACACAGGTGGATATGCTGCTGCCTTCTCTCAACCTCCCTGGCCTTATGGGAGGACCTTTTTCCGCATGCCAGCAGGCAGATTCTCAGATGGTCGCCTCATGATTGATTTCATTGCCAACAGTTTTGGTCTACCATTTCTCAGTGCTTATCTTAATTCTCTGGGGTCCAATTACACAAATGGTGCAAACTTTGCCACGGCTGCTTCTACAATCCGACTACCGACTAGCATAATACCTGCAGGTGGGTTCAGTCCATTCTACCTGGACTTGCAATACGATCAGTTTGTGCAATTCAAGTCCAGAACACTAAAGATAAGGAAACGAGGTGGGGTGTACAAGGACTTAATGCCCAAGGAGGAGTATTTTCCCAAAGCTCTATACACGTTGGACATCGGTCAGAATGATCTTGGTGAAGGGTTCTTTGCTAACAAGTCAATCCAGGAAGTCAATGCAACTGTCCCTGATATAATCAATGGTTTCTCCACCAATGTCAGGCGTATTTACAAGTCGGGAGCAAGATCATTCTGGATTCACAACACAGGACCCATCGGCTGCCTCGCCTATATCTTGGCCAATTTTCAGGCAGCTCAAAGGGACAGCGCCGGTTGTTCAAAGCCTCACAATGAAGTGGCTCAGTACTTCAACTACAAGTTGAAGGAGGCTGTTGCCCAACTCCGGAAGGACTTTCCTTTAGCTGCAATTACATATGTCGATGTCTACTCTGTCAAGTATTCCCTCTTTAGCCAACCCAAGAAATATGGGTTTGAGCTTCCACTTGTGGTTTGCTGTGGCTATGGAGGTGAGTACAACTACAGCAATGATGCTGGCTGTGGTAGTACCATCACTGTTAATGGTAGCCAAATTTTTGTGGGATCATGTGAGCGCCCTTCACTTCGAGTGAATTGGGATGGAGTTCACTACACTGAGGCAGCTAACAAATTTGTTTTTGATCAAATCTCCAGTGGAGCATTTTCAGATCCGCCTCTGCCCTTAAAAATGGCATGTCATAGGAACGCTTCATATTAA 1236 0.4482 MSFIAEPALHLLNYYCFTDMNKPSPSTTRLATSLCCICVLLSFTTTVINPVVALENCKFPAIFNLGASSSDTGGYAAAFSQPPWPYGRTFFRMPAGRFSDGRLMIDFIANSFGLPFLSAYLNSLGSNYTNGANFATAASTIRLPTSIIPAGGFSPFYLDLQYDQFVQFKSRTLKIRKRGGVYKDLMPKEEYFPKALYTLDIGQNDLGEGFFANKSIQEVNATVPDIINGFSTNVRRIYKSGARSFWIHNTGPIGCLAYILANFQAAQRDSAGCSKPHNEVAQYFNYKLKEAVAQLRKDFPLAAITYVDVYSVKYSLFSQPKKYGFELPLVVCCGYGGEYNYSNDAGCGSTITVNGSQIFVGSCERPSLRVNWDGVHYTEAANKFVFDQISSGAFSDPPLPLKMACHRNASY* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0299 411 CDD SGNH_plant_lipase_like 60 392 IPR035669 -
Vvi18g0299 411 Pfam GDSL-like Lipase/Acylhydrolase 62 389 IPR001087 GO:0016788
Vvi18g0299 411 Gene3D SGNH hydrolase 52 393 IPR036514 -
Vvi18g0299 411 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 36 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0299 Vvi-Chr18 2914955 2920528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0299 60 396 Acyl Lipid Metabolism Gene Families AT4G10950 26.934 3.46e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0299 - - vvi:104882465 798.505