Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0298 ATGGAGTCTCCCAGCACCATCAGAGTTGCCACTTCTCTCTGCTATTTTTGCGTGCTTTTATCTTTTACTACCACAGTGATCGACCCTGTTGTTGCTTTGGAAAATTGCAAATTTCCAGCAATCTTTAACTTAGGAGACTCCAATTCAGACACAGGTGGATATGCTGCTGCCTTCTCTCAACCTCCCTGGCCTTATGGGAGGACCTTTTTCCGCATGCCAGCAGGCAGATTCTCAGATGGTCGCCTCATGATTGATTTCATTGCCAACAGTTTTGGTCTACCATTTCTCAGTGCTTATCTTAATTCTCTGGGGTCCAATTACACAAATGGTGCAAACTTTGCCACGGCTGCTTCTACAATCCGACTACCGACTAGCATAATACCTGCAGGTGGGCTCAGTCCATTCTACCTGGACTTGCAATACGATCAGTTTGTGCAATTCAAGTCCAGAACACTAAAGATAAGGAAACGAGGTGGGGTGTACAAGGACTTAATGCCCAAGGAGGAGTATTTTCCCAAAGCTCTATACACGTTGGACATCGGTCAGAATGATCTTGGTGAAGGGTTCTTTGCTAACAAGTCAATCCAGGAAGTCAATGCAACTGTCCCTGATATAATCAATGGTTTCTCCACCAATGTCAGGCGTATTTACAAGTCGGGAGCAAGATCATTCTGGATTCACAACACAGGACCCATCGGCTGCCTCGCCTATATCTTGGTCAATTTTCAGGCAGCTCAAAGGGACAGCGCCGGTTGTTCAAAGCCTCACAATGAAGTGGCTCAGTACTTCAACTACAAGTTGAAGGAGGCTGTTGCCCAACTCCGGAAGGACTTTCCTTTAGCTGCAATTACATATGTCGATGTCTACTCTGTCAAGTATTCCCTCTTTAGCCAACCCAAGAAATATGGGTTTGAGCTTCCACTTGTGGTTTGCTGTGGCTATGGAGGTGAGTACAACTATGGCAATGATGCCAGCTGTGGTAGTACCATTACTGTTAATGGTAGCCAAATTTTTGTGGGATCATGTGAGCGCCCTTCACTTCGAGTGAATTGGGATGGAGTTCACTACACTGAGGCAGCTAACAAATTTGTTTTTGATCAAATCTCCAGTGGAGCATTTTCAGATCCGCCTCTGCCCTTAAAAATGGCATGTCATAGGAACGCTTCATATTGA 1173 0.4535 MESPSTIRVATSLCYFCVLLSFTTTVIDPVVALENCKFPAIFNLGDSNSDTGGYAAAFSQPPWPYGRTFFRMPAGRFSDGRLMIDFIANSFGLPFLSAYLNSLGSNYTNGANFATAASTIRLPTSIIPAGGLSPFYLDLQYDQFVQFKSRTLKIRKRGGVYKDLMPKEEYFPKALYTLDIGQNDLGEGFFANKSIQEVNATVPDIINGFSTNVRRIYKSGARSFWIHNTGPIGCLAYILVNFQAAQRDSAGCSKPHNEVAQYFNYKLKEAVAQLRKDFPLAAITYVDVYSVKYSLFSQPKKYGFELPLVVCCGYGGEYNYGNDASCGSTITVNGSQIFVGSCERPSLRVNWDGVHYTEAANKFVFDQISSGAFSDPPLPLKMACHRNASY* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0298 390 Gene3D SGNH hydrolase 31 372 IPR036514 -
Vvi18g0298 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 18 377 - -
Vvi18g0298 390 Pfam GDSL-like Lipase/Acylhydrolase 41 368 IPR001087 GO:0016788
Vvi18g0298 390 CDD SGNH_plant_lipase_like 39 371 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0298 Vvi-Chr18 2912840 2914715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0298 39 375 Acyl Lipid Metabolism Gene Families AT4G10950 26.934 6.79e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0298 - - vvi:100262628 790.415