Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0296 ATGGCTCAGACCATGCTGATCACTCCTAGCGTTTCCGGGCATTCAGTGCTGGATTTGAAGCGACAGCCTCTGCTTCAGAGACTCAGGCCCAAGCCATTCTCCCACCTTCTCCTCCCTCCACTTCCCACCTCTTCCTCCACTTCATCTCCTGCATTTACAACTCTTGCTCTCTTCAAATCAAAGACCAAAGCCGCTCCTTCAAAGAAGGTTACGAAGCCGAAGCCACAGGTTGAAGATGGAATATTTGGCACCTCTGGTGGCATTGGCTTCACCAAAAAAAATGAGCTGTTCGTGGGTCGTGTTGCCATGCTCGGCTTTGCTGCATCCCTGTTGGGTGAGGCAATTACAGGGAAGGGAATCCTAGCACAATTGAATCTAGAAACTGGAATCCCTATCTACGAAGCTGAGCCACTTCTCCTCTTCTTCATCCTTTTCACCCTGCTTGGAGCCATAGGAGCTTTGGGTGACCGTGGCCGCTTCGTTGATGATGACCCTCCAACTGGAATTGAGGGGGCAGTCATCCCTCCCGGCAAAGGCCTCAGATCAGCATTAGGACTCAGGGAAGGAGGTCCTCTATTTGGATTCACAAAGTCGAATGAGCTGTTTGTGGGAAGATTGGCTCAGTTGGGCATCGTCTTCTCTATAATTGGAGAAATAATTACAGGGAAGGGAGCTCTGGCACAACTGAACATCGAGACAGGAGTTCCGATTAGTGATATCGAACCCCTCGTCCTCTTCAATGTCATTTTCTTCTTCTTTGCTGCATTGAATCCCGGGTCGGGAAAATTTGTGACAGATGACGAAGAGGAGTAG 813 0.4969 MAQTMLITPSVSGHSVLDLKRQPLLQRLRPKPFSHLLLPPLPTSSSTSSPAFTTLALFKSKTKAAPSKKVTKPKPQVEDGIFGTSGGIGFTKKNELFVGRVAMLGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDDPPTGIEGAVIPPGKGLRSALGLREGGPLFGFTKSNELFVGRLAQLGIVFSIIGEIITGKGALAQLNIETGVPISDIEPLVLFNVIFFFFAALNPGSGKFVTDDEEE* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0296 270 FunFam Photosystem II 22 kDa protein, chloroplastic 52 134 - -
Vvi18g0296 270 Pfam Chlorophyll A-B binding protein 86 216 IPR022796 -
Vvi18g0296 270 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 72 128 - -
Vvi18g0296 270 Gene3D Chlorophyll a/b binding protein domain 133 240 - -
Vvi18g0296 270 Gene3D Chlorophyll a/b binding protein domain 51 132 - -
Vvi18g0296 270 FunFam Photosystem II 22 kDa protein, chloroplastic 135 240 - -
Vvi18g0296 270 SUPERFAMILY Chlorophyll a-b binding protein 79 248 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0296 K03542 - vvi:100245393 467.233