Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0295 ATGGAAAAAAGGAAATGGCTGTGGAAAAGGAAGTCTTCTGAGAAAAGCCCTGGTGAGACTGAAAGTTCTGGATCAATATCCTCCCACTCTGAAAGATACTCGGATGACCAGGATGGATTGAAGTCATCTCCAAATCATAGCACTCAGTCACCAGAAGTTACATCCAAAGTTGCTACCAGTGGTGATGAAGTTAATGATAATGTGAAGAGTCTGACAGAGAAATTATCAGCTGCTCTTTTGAATGTTGGTGCTAAAGATGATTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCTGTTGCAGGCTGGGAAAAGGCTGAAAATGAGGTGGTGGTTTTAAAGCAACAACTAGAGGCTGCAGTTCAGGAGAACTTAGTGCTAGAAGATCGAGTGAGCCGTCTTGATGGTGCCATCAAGGAATGTGTTAGGCAGCTAAGACAAGCAAGGGAGGAGCAGGAGGAAAAGATCAGCGAAGCAGTGGTGAAGAAAACCCGTGAGTGGGAATCCACCAAATTTGAGCTTGAGAGCCAGCTTCTTGAGCTCCAAACACAAGTAGATGCTGCTAAAGCTGAACCTCCTGTTCCTTTTGACCCAGATCTGTGCCATATGCTTCAGGCTTTGGAGAAACAGAACTCAGCCCTCAAGTATGAGCTCCTCTCTCAATCTGAGGAGCTTCAGGCTTTGGAGAAAGAGAACTCAACCCTCAAGCTTGAGCTCCTTTCTCAATCTGAGGAGTTAGAGATTAGGACAATTGAGAGAGACTTGAGTACCCAAGCAGCAGAAACAGCTAGCAAGCAACATTTAGAAAGCATAAAGAAGGTAGCAAAGCTCGAGGCTGAGTGCCGAAGGCTAAAGGCCATGGCTCGTAAATCATCTTCAATCCATGATCATAGATCTGTTGCTGCTTCTTCACTTCATATTGAATCTCTCACTGATAGCCAGTCTGACAATGGAGAGCAGTTAAACATGGTGGATATCAGTCTCCACCAGACTAGCAGCTTTGATGTGAATGATTGTGAACCAAGTTGCTCAGACTCATGGGCATCTGCCCTAATTGCTGAGCTCGACCAATTCAAGAATGAAAAGGTTGTTAGTAGAAATCTTCCTGCATCATCCATTGAAATTGATCTCATGGATGATTTCCTTGAGATGGAGCGACTTGCTGCCCTGCCCCAGGCCGAGCATGGAAGCCGTAGCCTTGAATCACAAGCTGTTACCAACCAGACCAGTAATGAAGATAGTTCATTGAGAGCTGAGCTTGAAACCATGACTCATCGGATGGCTGAATTGGAAGAGAAGTTGGAGAAAATGGAAGCAGAGAAAGCTGAATTGGAGATAGCTCTAACAGTAAGTCAAGATTGTATTGAAGCATCCAAAATTCAGTTGAGAGAGGCTGAGATGAAGTTGGAGGAGATGCAAAAGGAGCTCGATTTTGCAAATGAATCAAAGCAAGCCCTTGAGTCTCAACTCATTGCAATGGAAGCAGAGGCTAGGACCATGTCTGCAAGGGTTGATTCCCTAGAAGCAGAGATAAAAAAAGAGCATGCTATGTCAGCAGAAATTGGAGTCAAATGTCAAGAATTGGAGGATGAACTACTGAAAAAGAAACAAGAACTCAAGTTTCAGCAAGCTGCAAGCTCAAATAGTGAACGAAAGGTGAAGCAGGAGGAGCTAGCCATTGCAGCTGGAAAACTTGCAGAGTGCCAGAAGACAATAGCATCTCTGGGGAAGCAACTAAAATCTCTGGCAACACTGGAAGACTTCCTGACCGATGCTGGGAACCTAGCAGACTTCTCTGGAAAATCAGTGATTTCTACAGCAGCAGGTGGAGAAACATGGCAGTTGCATTCCAATGACACATTTTTGCCTAGAAGAAGTGCTGATTCTTCCAACATGAGTGCTGAGATTTGTGGTCCTTCAATCAATGGTAACAATGGGAATTCATTCTCATCTTTGTCCCTCTCAGCTTCATCCATAAATCATCTCGGCTCCGATAAAACTCTTCAAGGGTTTGGAAACCAGTTGCCTCCAACTAGGAGTAGGAGTGGGATTCAGCTACAAAATCATTGA 2070 0.4444 MEKRKWLWKRKSSEKSPGETESSGSISSHSERYSDDQDGLKSSPNHSTQSPEVTSKVATSGDEVNDNVKSLTEKLSAALLNVGAKDDLVKQHAKVAEEAVAGWEKAENEVVVLKQQLEAAVQENLVLEDRVSRLDGAIKECVRQLRQAREEQEEKISEAVVKKTREWESTKFELESQLLELQTQVDAAKAEPPVPFDPDLCHMLQALEKQNSALKYELLSQSEELQALEKENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKAMARKSSSIHDHRSVAASSLHIESLTDSQSDNGEQLNMVDISLHQTSSFDVNDCEPSCSDSWASALIAELDQFKNEKVVSRNLPASSIEIDLMDDFLEMERLAALPQAEHGSRSLESQAVTNQTSNEDSSLRAELETMTHRMAELEEKLEKMEAEKAELEIALTVSQDCIEASKIQLREAEMKLEEMQKELDFANESKQALESQLIAMEAEARTMSARVDSLEAEIKKEHAMSAEIGVKCQELEDELLKKKQELKFQQAASSNSERKVKQEELAIAAGKLAECQKTIASLGKQLKSLATLEDFLTDAGNLADFSGKSVISTAAGGETWQLHSNDTFLPRRSADSSNMSAEICGPSINGNNGNSFSSLSLSASSINHLGSDKTLQGFGNQLPPTRSRSGIQLQNH* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0295 689 Coils Coil 204 245 - -
Vvi18g0295 689 MobiDBLite consensus disorder prediction 1 17 - -
Vvi18g0295 689 Coils Coil 455 510 - -
Vvi18g0295 689 MobiDBLite consensus disorder prediction 667 689 - -
Vvi18g0295 689 Coils Coil 171 191 - -
Vvi18g0295 689 Coils Coil 525 545 - -
Vvi18g0295 689 Coils Coil 103 162 - -
Vvi18g0295 689 MobiDBLite consensus disorder prediction 40 65 - -
Vvi18g0295 689 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 225 673 - -
Vvi18g0295 689 Coils Coil 413 450 - -
Vvi18g0295 689 MobiDBLite consensus disorder prediction 1 65 - -
Vvi18g0295 689 MobiDBLite consensus disorder prediction 393 416 - -
Vvi18g0295 689 MobiDBLite consensus disorder prediction 396 416 - -
Vvi18g0295 689 Pfam Filament-like plant protein, long coiled-coil 324 415 IPR008587 -
Vvi18g0295 689 Pfam Filament-like plant protein, long coiled-coil 85 290 IPR008587 -
Vvi18g0295 689 Pfam Filament-like plant protein, long coiled-coil 408 584 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0295 Vvi-Chr18 2899090 2905064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0295 - - vvi:100252368 1195.26