Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0287 ATGGCTTCAGATTTTGCATTAAAAGTTCCACCAGAACTTGAGGCAGAATCACGGTTGAGGACTGTGCAGTACTTTGTAACCCATAGGCCTTGGCTTGATCTTTATGGAGTTCATGTTAGACCGGTTGCCCCATTTGGGAGTGCAAGCAGTAAACCATTTGTTGACCCGGCACTAATCCACCGGTGCTTGCCCGATGAGCTACTCTCTGAGGTATTTGCACGAATGACTCCATATACCTTAGGGAGGGCAGCTTGTGTTTGTCGAAAATGGAGATATACCATTCGTAACCCTGTGTTCTGGCGCAGCGCATGTTTAAAAGCTTGGCAGCTCTCTGGAGTTGTGGAAAATTATAAGATTTTGCAGTCAAGATATGAGAGCTCATGGAGAAAAATGTGGCTCTTAAGACCAAGGGTCCGTACTGATGGTCTTTATGTGAGTAGGAACACCTACATTCGTGCTGGAGTTGCAGAGTGGAGAGTTACCAATCCAGTTCATGTGGTCTGCTATTTTCGCTACATTAGGTTTTTTCCTTCTGGCAGGTTTCTTTATAAGAATTCCTCTCAAAAAGTCAAGGATGTGGTAAAATGCATGAACTCCCGAGCATCTAAAGCAGACTGTGTCTTCAGTGGCCACTATACTTTGTCGGATGACAAGATTGAAGCTGCTGTCTTGTACCCAGGCATGCGTCCTACTGTGTGGAGAATCCGCTTAAGGTTGAGAGGAACAACAGCAGGGGCTAACAATCGGATGGATGCTTCTGTCACTTGTTACAAGTGGTGTGAGTGA 786 0.4555 MASDFALKVPPELEAESRLRTVQYFVTHRPWLDLYGVHVRPVAPFGSASSKPFVDPALIHRCLPDELLSEVFARMTPYTLGRAACVCRKWRYTIRNPVFWRSACLKAWQLSGVVENYKILQSRYESSWRKMWLLRPRVRTDGLYVSRNTYIRAGVAEWRVTNPVHVVCYFRYIRFFPSGRFLYKNSSQKVKDVVKCMNSRASKADCVFSGHYTLSDDKIEAAVLYPGMRPTVWRIRLRLRGTTAGANNRMDASVTCYKWCE* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0287 261 CDD F-box_AtGID2-like 61 104 - -
Vvi18g0287 261 Pfam F-box-like 61 106 IPR001810 GO:0005515
Vvi18g0287 261 SMART fbox_2 63 103 IPR001810 GO:0005515
Vvi18g0287 261 FunFam F-box protein 7 49 141 - -
Vvi18g0287 261 SUPERFAMILY F-box domain 61 139 IPR036047 GO:0005515
Vvi18g0287 261 Gene3D - 52 141 - -
Vvi18g0287 261 ProSiteProfiles F-box domain profile. 57 103 IPR001810 GO:0005515
Vvi18g0287 261 PANTHER F-BOX ONLY PROTEIN 48-RELATED 43 253 IPR045118 GO:0019005|GO:0031146
Vvi18g0287 261 Pfam F-box only protein C-terminal region 117 253 IPR045464 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0287 K10295 - vvi:100247171 525.013