Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0281 ATGGGCTGCGGAGGCTCCAAGGTTGATGATTATCCGTTGGTAACTCTTTGCAGAGAGCGTAAGGAGTTGATCAGGGCCGCCGCGGAGCACCGTTACGCTCTCGCTTCCGCTCACATTTCTTACTTCCGATCCTTGAAGGATGTTGGTGATGCTCTTCGCCGATTCGTCGACGAAGAGCTCGTGATTGGTGCCACTTCGCCGTTGGATTCGCCGGTTCTCACGTTGCCCTCACAGGAAGGAAAAAGGAAAAACAGGAATAAGAGTGGTGAGAATAGTGGTAATAATAAAGGTTCGTCTTCGTCAACTTCGATTCCACATACAGTTTCGCCTCATACGCCGGAAGAGGACGCAGGGGAAGGGTCTCACTTGCATTTATCATCTGGGTCGGAATCTGAATTGGGTTCTTCATCTGGTCACATTCATATCGAGGACTCTCCAGAATTGGAGAGGCGGTATAATTCGTCTCCTCCAATGGGTTGGAGCCCACCTGGAATGAATTCATATTCATATTACATGAAGTCCTCTCCTGCCCCACCAAATGTGGTGTACGAGGAGGTGCAAAGATCTCCAACGGAGAATGAGCAATGGGGGAACTCTGGTTACGCTTATCCAGGCTATCCATACGCGAATGGAGGGTACTATGGGGATCCTCATTATAATTCACAACCGAGTCCTCGAGCTGCTCCACCATCCCCTCCTTCACCCAAGGTCTCTGCCTGGGACTTTTTGAATCCATTTGATTCATATGATAGTGTTTACCCAAGTTATTATTCACAGAGTAGATACGGATCAGCTGCAGGTAGTAGTCCTGATTCGAAGGAAGTGAGGGAGAGAGAGGGAATTCCCGATTTGGAAGATGAAACAGAGCAAGAAGTGACGAAAGCGGTTCACCAAAAAGAAAAGAAATTGAATGATTATGTAAATAGAAATTCAGGCGAGGGTACTTCAAGGGCAGTACCAGTGAAGCGTGGTGAAGACAATTCATGGACGGTGCCATCAAAAAAGAGTGAGAACACGCAATCAGCCCAAGGAAGAGAAGGAAAAGAGATAAAGAGCAGCCCTGATACCATTGTATCGAAGAGCTCTGAAGAGGGGTCGACAAAGAAAAAATCTGTCAGTTTTGAAGAGGCATCAGTGCATGATATTGAATCCTCCAAACAGAGTAGCATGACCACATTGTCTGCCCATGGCACACGAGACCTTCAGGAGGTTGTCAAGGAAATCAGGGATGAATTTGAGACAGCATCTGGTTATGGGAAAGAGGTTTCAATGTTGCTCGAGGTGGGCAAGTTGCCTTATCAGCCTAGAGGCACTGTATTTAAAGTGATCTTGTCCAGGATCTTGTATCTTATAGCCCCTTCAACCTCATCTTCACACTTTCCATCCAGTCAGTCTGTACAAATGGCTTACAGCACACTGAAAATGGCAAAAGCCTACTATGGGGATTCCTGGAAGGATATCTATACGAAGCCAAACAAACTTTCATCAACTTTGGACAAGTTGTATGCATGGGAGAAGAAACTATATAAGGAAGTTAAGGATGAGGAAAGGCTTCGGATTATCTATGAAAAGAAGTGCAGGAGGCTTAGAGCTTTGGATAACGGAGGAGCTGAGTCCAGTAAAATTGATGCTGCCCAGGCTTCAATAAGAAAGTTGCTGACAAAAATTAATGTTTGTATCAGAGCTGTTGATGCGATCTCAGGCAGGATACACAAGTTGAGGGATGAAGAGTTGCAGCCCCTACTCACCGAATTGATTCATGGATTGATCAGAATGTGGAAGTCCATGCTCAAGTGTCATCAGAAGCAGTTCCAAGCCATATTAGAGAGTAAAACTCGCACTCTGAAAGCACGAACAGGCTTTAGAAGAGATTTGATCTTGAGAGCAACTGTAGAACTCGAAATGGAGCTCCTGAATTGGTGCACCCGTTTTAACAATTGGGTTAACATCCAAAAGAGCTATGTTGAGTCCTTGAATGGGTGGCTATTGAGATGCCTTCTTCATGTACCTGAAGAAACGGATGATGGAATTGTCCCCTTCTCTCCAGGCCGGATTGGAGCTCCAGCAATCTTCGTAATGTGTCATGATTGGTACCAATCCATGGAAAGAATTTCAGAAGCTGCAGTAGCAGATGCCTTGCAAGATTTCGCAATGAAATTGCACCAGTTATGGGACAGGCAAGACGGGGAGCAAGTTCAAAGGCTCAAAGCAGATTACCTTTCAAAGGATTTTCAGAAGAGGCTAAAAACACTTCGCATGGAGATGAAGAGAATTGACCATGAGCAAGATGCATTGTCAGAGAAAACAGCGGTCTCAATTGTTGCCTCTGAAAGCGGAATTTCACCACTGGATGATCTGAGGGTGGATTTGGATTCAATGAGAAAGAGAATAGCTGAAGAGAGAACCGGGCATAAGGGGGCCATTAAACTGGTGCCCGCCGCAGCCTCTGCCAGTTTGCAAGCAGGTCTGATCCCTATTTTTGAGGCTTTGGAGAATTTCACTTCAGAGGCACTGAAAGCTCATGAGCAAGTGAGGCTTCAAAACACCGGGGAGGCTCAGGGAAACTAA 2568 0.4591 MGCGGSKVDDYPLVTLCRERKELIRAAAEHRYALASAHISYFRSLKDVGDALRRFVDEELVIGATSPLDSPVLTLPSQEGKRKNRNKSGENSGNNKGSSSSTSIPHTVSPHTPEEDAGEGSHLHLSSGSESELGSSSGHIHIEDSPELERRYNSSPPMGWSPPGMNSYSYYMKSSPAPPNVVYEEVQRSPTENEQWGNSGYAYPGYPYANGGYYGDPHYNSQPSPRAAPPSPPSPKVSAWDFLNPFDSYDSVYPSYYSQSRYGSAAGSSPDSKEVREREGIPDLEDETEQEVTKAVHQKEKKLNDYVNRNSGEGTSRAVPVKRGEDNSWTVPSKKSENTQSAQGREGKEIKSSPDTIVSKSSEEGSTKKKSVSFEEASVHDIESSKQSSMTTLSAHGTRDLQEVVKEIRDEFETASGYGKEVSMLLEVGKLPYQPRGTVFKVILSRILYLIAPSTSSSHFPSSQSVQMAYSTLKMAKAYYGDSWKDIYTKPNKLSSTLDKLYAWEKKLYKEVKDEERLRIIYEKKCRRLRALDNGGAESSKIDAAQASIRKLLTKINVCIRAVDAISGRIHKLRDEELQPLLTELIHGLIRMWKSMLKCHQKQFQAILESKTRTLKARTGFRRDLILRATVELEMELLNWCTRFNNWVNIQKSYVESLNGWLLRCLLHVPEETDDGIVPFSPGRIGAPAIFVMCHDWYQSMERISEAAVADALQDFAMKLHQLWDRQDGEQVQRLKADYLSKDFQKRLKTLRMEMKRIDHEQDALSEKTAVSIVASESGISPLDDLRVDLDSMRKRIAEERTGHKGAIKLVPAAASASLQAGLIPIFEALENFTSEALKAHEQVRLQNTGEAQGN* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0281 855 MobiDBLite consensus disorder prediction 124 138 - -
Vvi18g0281 855 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vvi18g0281 855 MobiDBLite consensus disorder prediction 383 397 - -
Vvi18g0281 855 MobiDBLite consensus disorder prediction 67 156 - -
Vvi18g0281 855 Coils Coil 741 768 - -
Vvi18g0281 855 PANTHER UNCHARACTERIZED 1 846 - -
Vvi18g0281 855 MobiDBLite consensus disorder prediction 362 382 - -
Vvi18g0281 855 MobiDBLite consensus disorder prediction 212 241 - -
Vvi18g0281 855 MobiDBLite consensus disorder prediction 259 397 - -
Vvi18g0281 855 Pfam Protein of unknown function (DUF632) 401 721 IPR006867 -
Vvi18g0281 855 MobiDBLite consensus disorder prediction 271 307 - -
Vvi18g0281 855 MobiDBLite consensus disorder prediction 90 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0281 Vvi-Chr18 2777880 2784606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0281 227 734 Acyl Lipid Metabolism Gene Families AT2G27090 27.222 8.14e-48 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0281 - - vvi:100254101 1568.13