Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0277 ATGTCCGGAGCTTCTTCAAGGTCGCAAAGATCCTCCACCAACATCTCGCCCTTCCGGTCACGGAAGTCGCCGGCGCCTCCTTCGGCCCCGCCTAAGTCCAATGGCCGGCCGACGACCCCCTCGACGGCGTCTTCAAGGCCCCCCTCCAGGTTATCGGTTTCTCCGGTGGGTCCGTCAACACCGTCTCTGGACCGGCCCGAAGTCAGTAGAGCCAAAGAAAATGTGACGGTCACTGTCAGGTTTCGTCCTCTCAGTCCTCGGGAGATCAACAAAGGTGATGAGATTGCGTGGTATGCGGATGGAGACTATACTGTTCGAAACGAGTACAATTCCTCCACCGCGTATGGTTTTGACAGAGTGTTTGGTCCAGCAACGACAACACGCCATGTTTATGATGTTGCTGCTCAGCATGTTGTGGGTGGAGCCATGCAAGGGATCAATGGTACTGTATTTGCTTATGGTGTTACTAGCAGTGGGAAAACACACACAATGCATGGGGAGCAAAAATCACCTGGAATTATTCCATTGGCAGTGAAGGACGTATTTGGAATTATACAAGAGACACCTGGGCGGGAGTTTCTTCTTCGTGTTTCTTATTTAGAAATTTACAATGAGGTCATCAATGATTTGCTCGATCCAACAGGGCAGAACTTAAGAATACGAGAGGATAGTCAGGGAACTTATGTTGAGGGAATCAAAGAGGAAGTTGTTCTATCCCCTGCTCATGCTCTTTCCTTAATAGCAGCTGGTGAAGAGCATAGGCATGTGGGTTCTAATAATTTCAATTTATTTAGCAGTCGCAGCCACACTATTTTCACCTTGACCATTGAAAGCAGTCCTCATGGGGAAATTGAAGGAGAAGAAGATGTGACCTTGTCCCAGTTGAATTTAATTGATCTTGCGGGATCTGAAAGTTCTAAAACTGAAACTACTGGATTGCGGAGAAAAGAGGGTTCATACATTAATAAAAGCTTACTTACTCTTGGCACTGTGATTTCCAAACTAACGGATGACAAGGCAACTCATATTCCCTATCGAGATTCAAAACTCACCCGTTTGTTGCAGTCATCCCTAAGTGGCCATGGACGTGTTTCTCTTATTTGCACTGTAACACCTGCATCTAGCAATACTGAAGAGACACACAATACACTAAAGTTTGCGCATCGAAGCAAGCGTGTTGAAATCAAGGCTTCTCAAAATAAGATTATGGATGAGAAGTCTCTTATAAAAAAGTACCAAAAGGAAATTTCCAGTTTAAAACAAGAGCTTCAGCAGTTAAAACGTGGAATGATGGAGAACCCATATATGATGACTGGGTCTACCCAAGAAGATTTGGTTAACTTGAAGCTTCAGTTGGAAGCTGGTCAGGTTAAATTACAATCAAGATTGGAGGAGGAGGAACAAGCCAAGGCTGCTTTGATGGGAAGAATTCAGCGTTTAACTAAACTTATCTTGGTTTCTACAAAAAATAGTATGCCATCAAGCCTTCCTGATACGGCTGGCCATAGGCGAAGGCATTCTTTTGGAGAAGATGAGCTAGCATACTTGCCTAATAGAAAAAGGGAATACATGATTGGTGATGATACTGGAAGCTTTGATTCTGAGCTTTTGGAAGGAAGGAGTGACATCACTTATCTAGATGATTTGGTTAAAGACTACAAAAGGAACAGGAGGCGTGGAATGCTTGGATGGTTTAAACTGAAAAAACCTGAGAACCTGGGTGGATTTTCGCCAAATGCTGATACTGAGAGCTCGACAAGTGCGTCACCTTCATCCAGTTCAAAGTCATTGCAAAACAGAGTCATGTTTAATGATAAAAAAGATGCACGGAGAAAATCAACCAGTAGAAGGGGTGATGATTCTTCGGTTGTCAACTCATTTTCAGAAAGGACCCAAGCAGGTGACTTGTTCTGTGCTGCCGTTGGAGGCCGGCGTCTGCCTTCGACTGGTAGCACCATCACAGATCAAATGGATCTTTTGCGTGAGCAGATGAAGATGTTAGCTGGTGAAGTGGCATTGTGTACTAGTTCTCTGAAAAGGCTATCAGAGCAAGCAGCAAGCAATCCTGAAGATTCTCAACTTAAGGAACACATGCAGAAATTGAAAGATGAAATTAGTGAAAAGAAACTTCAAATGCGTGTACTGGAGCAACGTATGATTGGATCAGTTGAAATGACTCCACATACAAATACCATTGAAATGTCTCAGGCACTGTCCAAGCTCACTACTCAGCTAAATGAGAAAACTTTTGAACTTGAGATTACATCAGCAGACAATAGGATACTTCAGGAGCAACTACAGATGAAGATGTCAGAGAATGCTGAGATGCAAGAAACAATTCTTCTGCTAAGGCAACAACTTAATTCATTATTAGATAAAAGCTCTAGCAGTCCACAACAAATTCCTGACAATGGGGCTAGCACACTAAAGAAATTTTCTAAGGAGTTATTTGAAAAGAAAAATGAAGGAAAAGAAGATACTTATATTGATGAAAATACACCAACTAGTGTTATGAGCTTGAATAGAATATTCTCTCAAGAGGATTCCAAAGAGTGCAATGGTGACACCTTTTTAAGCTCCCAAGTTCTTATGCAGGCCTCTGAAATAGAGAATTTGAAGCAAGAGAAAGTAAGACTGATTGAAGAAAAGGATGGGCTTGAAATTCACAGCCGAAAACTGGCAGAAGAAGCTTCATACGCAAAAGAGTTGGCAGCTGCTGCAGCAGTTGAGCTCCGAAACTTGGCTGAAGAAGTAACTAAACTTTCTTACCAAAATGCAAAATTGACTGGTGACCTGGCTAGTGCAAAAGAGGCCCCTTGTAGATCTAACTGTTGTCAGAGGCCTGGGTCATTTGATGTGAGGCAAAGTAACAGCAATGGTGCTCGGCTGGATGCACGCTTGAGAAAACCAGGGGATGGCATGTTGGTTGAGGAGTTGCAGAAAGAACTTAATGCAAGATACCAAAGAGAATCTTCTCTGGAAACTGCATTATTTGAGAGAGATCAAATTGAAGGTGAGTTACGAGGAAGGCTTGATGAAGCAAAACAGCGTGAAGAAGATTTAGAAAATGAGCTTGCAAATATGTGGATGCTAGTTGCAAAGATGAGAAAATCTGGTACTACTTCTGAGGAAACATCATCTGAAGGAGTTCATGAATCCAACATTTTGCAAAGTAGAGTGAGAAATGGATTTCCACCAATTAATGGTCACTCAAACAAAATATTTGATGAAATTTGTGAAAACATGGATGAGATAAGTACATCTGAAGAATTAAGGACCAGTTATCTGAAAGAAAAGAGAAGGTGCAAAGAACTAGAAAGCCTTGTTTCCAGATTGAAGGGTGAAGATATTATTGGACTGGATATGACAGCTCTTGAAGAATTGCAGAACCTTCATGTTCAGGCTATAACTAAGATTTGCCATGCAAAGGTGATAATTATTTGGTTTGCTTGA 3453 0.422 MSGASSRSQRSSTNISPFRSRKSPAPPSAPPKSNGRPTTPSTASSRPPSRLSVSPVGPSTPSLDRPEVSRAKENVTVTVRFRPLSPREINKGDEIAWYADGDYTVRNEYNSSTAYGFDRVFGPATTTRHVYDVAAQHVVGGAMQGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFGIIQETPGREFLLRVSYLEIYNEVINDLLDPTGQNLRIREDSQGTYVEGIKEEVVLSPAHALSLIAAGEEHRHVGSNNFNLFSSRSHTIFTLTIESSPHGEIEGEEDVTLSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTDDKATHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPASSNTEETHNTLKFAHRSKRVEIKASQNKIMDEKSLIKKYQKEISSLKQELQQLKRGMMENPYMMTGSTQEDLVNLKLQLEAGQVKLQSRLEEEEQAKAALMGRIQRLTKLILVSTKNSMPSSLPDTAGHRRRHSFGEDELAYLPNRKREYMIGDDTGSFDSELLEGRSDITYLDDLVKDYKRNRRRGMLGWFKLKKPENLGGFSPNADTESSTSASPSSSSKSLQNRVMFNDKKDARRKSTSRRGDDSSVVNSFSERTQAGDLFCAAVGGRRLPSTGSTITDQMDLLREQMKMLAGEVALCTSSLKRLSEQAASNPEDSQLKEHMQKLKDEISEKKLQMRVLEQRMIGSVEMTPHTNTIEMSQALSKLTTQLNEKTFELEITSADNRILQEQLQMKMSENAEMQETILLLRQQLNSLLDKSSSSPQQIPDNGASTLKKFSKELFEKKNEGKEDTYIDENTPTSVMSLNRIFSQEDSKECNGDTFLSSQVLMQASEIENLKQEKVRLIEEKDGLEIHSRKLAEEASYAKELAAAAAVELRNLAEEVTKLSYQNAKLTGDLASAKEAPCRSNCCQRPGSFDVRQSNSNGARLDARLRKPGDGMLVEELQKELNARYQRESSLETALFERDQIEGELRGRLDEAKQREEDLENELANMWMLVAKMRKSGTTSEETSSEGVHESNILQSRVRNGFPPINGHSNKIFDEICENMDEISTSEELRTSYLKEKRRCKELESLVSRLKGEDIIGLDMTALEELQNLHVQAITKICHAKVIIIWFA* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0277 1150 Coils Coil 463 483 - -
Vvi18g0277 1150 FunFam Kinesin-like protein KIN-7G 66 424 - -
Vvi18g0277 1150 ProSitePatterns Kinesin motor domain signature. 293 304 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi18g0277 1150 Coils Coil 1095 1115 - -
Vvi18g0277 1150 Gene3D Kinesin motor domain 66 425 IPR036961 -
Vvi18g0277 1150 Coils Coil 691 718 - -
Vvi18g0277 1150 MobiDBLite consensus disorder prediction 601 618 - -
Vvi18g0277 1150 CDD KISc_CENP_E 74 393 - -
Vvi18g0277 1150 MobiDBLite consensus disorder prediction 1 71 - -
Vvi18g0277 1150 MobiDBLite consensus disorder prediction 35 59 - -
Vvi18g0277 1150 Coils Coil 759 793 - -
Vvi18g0277 1150 MobiDBLite consensus disorder prediction 575 626 - -
Vvi18g0277 1150 Pfam Kinesin motor domain 80 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0277 1150 PANTHER CENTROMERE PROTEIN E 71 1045 IPR027640 GO:0003777|GO:0007018
Vvi18g0277 1150 Coils Coil 1004 1024 - -
Vvi18g0277 1150 MobiDBLite consensus disorder prediction 577 600 - -
Vvi18g0277 1150 MobiDBLite consensus disorder prediction 1 21 - -
Vvi18g0277 1150 SMART kinesin_4 72 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0277 1150 Coils Coil 862 889 - -
Vvi18g0277 1150 PRINTS Kinesin heavy chain signature 343 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0277 1150 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0277 1150 PRINTS Kinesin heavy chain signature 145 166 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0277 1150 PRINTS Kinesin heavy chain signature 259 276 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0277 1150 ProSiteProfiles Kinesin motor domain profile. 74 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0277 1150 Coils Coil 395 429 - -
Vvi18g0277 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 428 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0277 Vvi-Chr18 2688559 2731306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0277 54 1037 Miscellaneous Gene Families AT4G39050 54.146 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0277 K11498 - vvi:100248995 2110.49