Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g0271 | ATGGTTGGCAAGAACTGCTTTGCAATCGCCAGCGATCGCCGATTCGGCGTTCAGCTCCAGACCGTCGCTACCGATTTTCAGAAAATTTACAGGATCCACGATCGGGTTTTTCTCGGTCTGTCCGGACTGGCTACCGATGCTCAGACTCTATATCAACGGCTTGTTTTTCGGCACAAACTGTATCAGCTTCGAGAGGAGAGGGATATGAAGCCCGAAACCTTTGCAAGCCTTGTATCTGCTCTTCTTTATGAGAAAAGGTTTGGTCCATACTTCTGCCAGCCTGTGATTGCTGGATTGGGAGATGAAGACAAGCCATTCATTTGCACAATGGATTCAATTGGAGCCAAGGAGCTTGCTAAAGATTTTGTTGTTGCTGGTACTGCCTCTGAGTCTCTTTATGGTGCCTGCGAGGCCATGTTCAAGCCCGACATGGAACCTGAGGAATTATTTGAGATCATCTCTCAAGCACTGCTCTCATCAGTAGATCGTGACTGCTTGAGTGGTTGGGGAGGACATGTCTATGTTGTCACACCAACTGAAGTGAAGGAGAGGATCTTAAAAGGAAGGATGGATTGA | 576 | 0.4757 | MVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD* | 192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g0271 | 191 | FunFam | Proteasome subunit beta | 1 | 191 | - | - | |
| Vvi18g0271 | 191 | CDD | proteasome_beta_type_3 | 1 | 187 | IPR033811 | GO:0019774|GO:0043161 | |
| Vvi18g0271 | 191 | Pfam | Proteasome subunit | 1 | 176 | IPR001353 | GO:0005839|GO:0051603 | |
| Vvi18g0271 | 191 | Gene3D | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | 1 | 191 | IPR029055 | - | |
| Vvi18g0271 | 191 | PANTHER | METALLOPROTEASE TLDD | 2 | 184 | IPR023333 | - | |
| Vvi18g0271 | 191 | ProSiteProfiles | Proteasome beta-type subunit profile. | 1 | 176 | IPR023333 | - | |
| Vvi18g0271 | 191 | SUPERFAMILY | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 1 | 191 | IPR029055 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g0271 | K02735 | - | vvi:100250625 | 385.956 |