Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0258 ATGGAGACTCCAAGCCCTAGAGAGATGAACCGCATAACACTTCTCTTTTTCTTTCTCAGTTTGGTCATCACACTCTTCTCTGCAGCGGCGGACCATGACGGCCCCACCACCAGCACCACCAGCATCATCTTCACAACGCTGGGGAGATCCGACTATGCCTTCGACGTTTTCAGCCTCCCGACTCTGGGGCCTTCTACTATCGCCGACGAGCTTCGGATTACCGATGGTCAGTCCGTGAATTTCAACGGTCATTTCCCATCTTCTCCAATTATTTCTCTTCTAGCCAATCAAACCCTAGTTGAAAGCTCAAGCGTGAAACGCCCAGATGAGTCTCTGCAAACCATCTATGTCACCGAGAGAAATGGGTCGTCGAATATATATCTTGACATAATCTATTATGATACTCCCACGAACTCTAGGAGAAGATCTGCACTGGAGACCGCAGTTCGAGTTGAGGTTCCGCTATTGGGTACTAACACTGAACAGAGCGACGGTCGAATTTCGATGAAAGACAGGCCTAGCTTAGTTGGTGAGGACTTGGTTTACGTATCGACTCACGAGGACTCGGGTGTGCCCAGGAAAAGTTGGGCTGCTGTCTACTCGACTCATCTTCCGACGGGGTCGACTAGGCGGTTGACACCGTATGGGGTGGCTGATTACAGCCCGGCTGTATCGCCGTCGGGGGTATGGACAGCGGTGGCTTCTTATGGAGAGAGAGGCTGGGGTGGGGAAGTTGAAGAGCTCAGCACCGATATCTACGTTTTCAGGACTCGTGATGGGTCTGAGAGGACGAAAGTTGTGGAACACGGTGGTTGGCCGTGTTGGGTCGATGATTCTACTCTGTTTTTCCACCGTAGAGGCAGCGATGGCTGGTGGAGTATCTACAGAGCGATTCTTACTGAGTCAGTGGTTATCGAGCGAGTCACTCCACCTGGTCTCCACGCTTTCACCCCAGCTACCTCGCCAGGCAACAAAAACTTCATTGCCGTGGCGACGAGAAGGCTCAATTCAGATTATCGCCACATTGAGTTGTTTGACCTTCTCAGTAACGAGTTTAGGGAATTAACTCGTCGGATTTCTCCCCAAACTCACCACTTTAATCCGTTCATCTCGCCCGATTCTACTCGAATTGGTTACCACAGATGCAGAGGCGACAGTAACGGAGGGAAAAGCCCTCACCTGCTGCTCGAAAACCTCAAAAGCCCATTACCTGAAATCTCTCTGTTTAGATTTGACGGTTCGTTCCCTTCGTTTTCACCGGGCGGCGACCGGATCGCTTACGTCGAATTCCCGGGGGTTTACGTGGTGAACCGGGACGGTTCTGGCCGGCGGGAGGTGTTCTCCGGAATCGCCTTCTCCACCGCTTGGGACCATAAACGGAAAGGGGTTGTATACACTAGTGCAGGTCCCACATTCGCTACAGAAAGCACAAAAGTGGATATAGTGTCTATCAACGTTGATGACGTTGACCAGCCTAGCTACAAAAAGTTGACCACCGGCGGTGAGAATAACGCATTTCCCTCGCCATCACCGGACGGGAAATGGATCGCGTTCCGGTCAGGCCGGTCTGGCTATAAGAATCTGTACATAATGGATGCTGTGGATGGAGAGAGAGGTGGGATCCATCGGTTAACAGAGGGCCCATGGACGGACACAATGTGTAATTGGTCACCGGACGGTGACTGGATTGTCTTTGCATCCGACCGGGAGAACCCGGGTGGTGGTGGGTTTGAACTGTACGTGATTCACCCTAACGGGACCGGCCTCAGGAAGGTGGTTCATAGCGGTTCAGCTGGGAGGACTAACCACCCATGGTTCAGCCCTGACGGGAAGAGCATTGTTTTCACTTCAGACTATGCCGCAGTATCAGCTGAGCCCATCTCCAACGCACATCACTACCAGCCTTATGGCGATATCTTTGTGGTGAATTTGGATGGCTCAGGGCTTCATCGATTGACACATAATTCATACGAGGATGGGACTCCCGCCTGGGCTCCCAAGGTCATTAGGCCGGTTGATGTGAAGTTGCAGGTGGACGGGCCACACTGCTCCTTTGAAGATTGTCACTGGCTCAGCAACACTCCGAATCATGGTGTTGAGGCTGCACCCTGGGTCTTGGCCAAGCCTCAGTGTGGTCTACGGGCCTAG 2148 0.5242 METPSPREMNRITLLFFFLSLVITLFSAAADHDGPTTSTTSIIFTTLGRSDYAFDVFSLPTLGPSTIADELRITDGQSVNFNGHFPSSPIISLLANQTLVESSSVKRPDESLQTIYVTERNGSSNIYLDIIYYDTPTNSRRRSALETAVRVEVPLLGTNTEQSDGRISMKDRPSLVGEDLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVSPSGVWTAVASYGERGWGGEVEELSTDIYVFRTRDGSERTKVVEHGGWPCWVDDSTLFFHRRGSDGWWSIYRAILTESVVIERVTPPGLHAFTPATSPGNKNFIAVATRRLNSDYRHIELFDLLSNEFRELTRRISPQTHHFNPFISPDSTRIGYHRCRGDSNGGKSPHLLLENLKSPLPEISLFRFDGSFPSFSPGGDRIAYVEFPGVYVVNRDGSGRREVFSGIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQPSYKKLTTGGENNAFPSPSPDGKWIAFRSGRSGYKNLYIMDAVDGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRENPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFTSDYAAVSAEPISNAHHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAPKVIRPVDVKLQVDGPHCSFEDCHWLSNTPNHGVEAAPWVLAKPQCGLRA* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0258 715 Gene3D - 575 670 IPR011042 -
Vvi18g0258 715 Gene3D - 410 574 IPR011042 -
Vvi18g0258 715 Gene3D - 172 401 IPR011042 -
Vvi18g0258 715 Pfam WD40-like Beta Propeller Repeat 555 581 IPR011659 -
Vvi18g0258 715 Pfam WD40-like Beta Propeller Repeat 604 618 IPR011659 -
Vvi18g0258 715 Pfam WD40-like Beta Propeller Repeat 495 530 IPR011659 -
Vvi18g0258 715 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 21 691 - -
Vvi18g0258 715 SUPERFAMILY DPP6 N-terminal domain-like 274 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0258 Vvi-Chr18 2477472 2479619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0258 - - vvi:100267814 1472.22