Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0256 ATGAAGATGAGCTCCGCCCCGAAGGACCTGCAACCACACCAAGTCTTCGACATCGATGGGGTACCTCAAGGTGCCTCCAAGTGCTTCGATGATGATGGCCGTCTCAAGAGGACTGGTACTTTCTGGACTGCTAGTGCTCACATAATAACAGCTGTGATTGGGTCGGGTGTCCTCTCCTTGGCCTGGGCCACTGCTCAGCTTGGATGGATTGCTGGCCCTGCTGTGCTCTTCTTGTTCTCATTTGTAACTTACTACACCTCAGTTCTTCTTTCTTCTTGCTACCGTACGGGTGACTCTGTGACTGGCAAGAGAAACTATACTTACATGGATGCTGTTCGTTCCAATCTTGGTGGAGCTAAGATGAAGATATGTGGGCTAATTCAGTACCTGAACCTTTTTGGAGTGGCCATTGGCTACACCATTGCAGCATCTATAAGCATGATGGCAATCAAAAGATCAAACTGCTTCCACGAGAGTCATGACAAAAATCCATGCCACATTTCAAGCAATCCATATATGATCATGTTTGGGATCTTTGAAATCATTCTCTCTCAAATACCAGACTTTGATCAGATATGGTGGCTTTCCATTGTTGCAGCAATCATGTCCTTTGCTTACTCCACAATCGGTCTAGGCCTTGGAGTCGCTAAAGTTGCAGAAAGTGGAAAATTTAGAGGAAGTCTCACTGGGATTAGCATTGGCACTGTCACACAAACTCAAAAAATATGGAGGAGCTTCCAAGCACTTGGGAACATAGCTTTTGCCTACTCTTACTCCATCATCCTCATTGAGATTCAGGACACAATCAAATCTCCTCCATCAGAGAAGAAGACAATGAAGAAGGCCACTCTTCTTAGTGTTATAGTGACCACACTGTTTTACATGCTCTGTGGCTGCATGGGCTATGCTGCTTTTGGAGACCTGGCCCCTGGAAACCTCCTCACTGGCTTTGGCTTCTATAACCCGTATTGGCTTCTTGATATAGCAAACGCAGCAATAGTTATCCATCTTGTTGGAGCATACCAAGTCTACTGCCAGCCCCTCTTCGCCTTCATTGAAAAATGGGCAGCAGAGAAGTTCCCTGATAGCCAGTTCATCACCAAGGAAATCAAAATCCCAATTCCGGGTTTCAAGCCTTACAATCTCAACCTCTTCCGCCTGGTTTGGCGAACAATTTTTGTGATAATAACCACAGTCATATCCATGCTCATGCCATTCTTCAATGACGTAGTTGGAATCCTTGGGGCCTTTGGATTTTGGCCTTTGACAGTATATTTCCCAGTGGAGATGTATATTGCACAGAAGAAGATCCCAAAATGGAGTACCAGATGGCTTTGCCTCCAAATCCTCAGCTTTGCTTGCCTAATTATTTCCATTGCTGCGGCTGCTGGCTCAGTTGCAGGGGTTATTCTTGACCTCAAGGTTTACAAGCCCTTCAAGACTAGCTACTGA 1452 0.4566 MKMSSAPKDLQPHQVFDIDGVPQGASKCFDDDGRLKRTGTFWTASAHIITAVIGSGVLSLAWATAQLGWIAGPAVLFLFSFVTYYTSVLLSSCYRTGDSVTGKRNYTYMDAVRSNLGGAKMKICGLIQYLNLFGVAIGYTIAASISMMAIKRSNCFHESHDKNPCHISSNPYMIMFGIFEIILSQIPDFDQIWWLSIVAAIMSFAYSTIGLGLGVAKVAESGKFRGSLTGISIGTVTQTQKIWRSFQALGNIAFAYSYSIILIEIQDTIKSPPSEKKTMKKATLLSVIVTTLFYMLCGCMGYAAFGDLAPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVYCQPLFAFIEKWAAEKFPDSQFITKEIKIPIPGFKPYNLNLFRLVWRTIFVIITTVISMLMPFFNDVVGILGAFGFWPLTVYFPVEMYIAQKKIPKWSTRWLCLQILSFACLIISIAAAAGSVAGVILDLKVYKPFKTSY* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0256 483 PANTHER OS05G0424000 PROTEIN-RELATED 41 466 - -
Vvi18g0256 483 FunFam Amino acid permease 6 34 473 - -
Vvi18g0256 483 Pfam Transmembrane amino acid transporter protein 37 471 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0256 Vvi-Chr18 2450706 2453991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0256 14 483 Organic Solute Cotransporters AT5G09220 78.316 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0256 K24917 - vvi:100262657 953.355