Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0247 ATGAGTTTTATTATATATTTTGCTTTAAATGACATTAGGGTTTTCATTTGTCGATTTGTTTATTATTGTTTGGCCACCGGATTAATTAAATCCAATTCAAGTAAGATTAAGACATGGAATAGGTGTAAAGCCTGGAGTGTTCTTGTTGCTGTTGCTCTTTCAATCCTCCATCAACAAACTGTGGTAGCCATGAAGGTTTTCAATGCGGAGTCGGGTGCCCTGGAGATGGATTCTGGAGAAAAGCGGCTCAATGAGCTTGGATACAAGCAAGAACTCAGAAGAGAGATGACTCTGTTTAAGACCCTGGCAATTACATTCTCGAGCATGGCGGTTTTCACAGGGACACCTCTTTATGGTTCATGTCTGCGATATGCAGGCCCTGCAAGCTTAATATGGGGATGGGTTGTGGTCACATTTTTCACATGGTTTGTTGGAATTGCCATGGCTGAAATATGCTCCTCTTTCCCAACAACTGGTTCCCTCTACTTCTGGGCTGCCCATTTGGCCGGACCCAGATGGGGGCCATTCGCGTCGTGGTGCTGTGCATGGCTCGAGGCCATAGGCCTCATTTCAGGAATTGGCGCTCAGGCATTTTCAGGATCTCAGGCACTGCAATTTATCATTCTTTTGGCCACTGGAAATAACAAGGGGGGAGGCTACTTTGCTTCCAAGGGCGTATTCTTAGGCATGTATGTGGGCCTCACCATCATTTGGGCAGTTCTCAACACGTTTGCACTACAAGTCGTTGCATTCCTTAGCATAATTTCCATATGGTGGCAGATCCTTGGTGGCCTGGTTGTGATTATAATGCTTCCACTGGTGGCGCGGCCGACACAATCAGCCTCTTACGTGTTCACTCATTTTGAAACCGCACCTGAATCAACAGGAATATCTAGCAAGCCTTATGCTGTAATTTTATCGGTACTCCTGAGCAACTACTGTTTATATGGCTACGACACTGCTGCTCATCTAACCGAGGAAACGAAGGGTGCTGATAGAACTGGCCCCATTGCAATTCTTTCTAGTATTGGGATCATCTCATTCTTCGGATGGGCTTACAACTTAGCTCTCACCTTCAGCATCCAGGATCCAAACTACTTATACGACCCAAACAATGAGACAGGTGGGGGCCTTGTACCAGCACAGATAATTTACGATGCATTCCACCGGAGATATCAGAGTGCCACCGGAGCTGTAGTTTTCATGTGCATCATCTGGGGATCCTTCTTCTTTTGTGGGCTTTCCGTCACAGCTAGTGCTGCCAGGGTTGTTTATGCTCTATCTCGAGATAAAGGAATTCCATTTTCACCAATTTGGCGAAAAATTCATCCCAAGTACAAGGTTCCAAGGAATGCAGTGTGGCTCTGTGCGGTCATCGGCATGCTTCTCGGGCTGCCCATCTTGAAACTGGACGTAATCTTCACTGCCATAATTTCAATAAGCACCATTGGGTGGGTCGGTGGCTATGCGGTCCCTATATTTGCGAGGCTGGTCATGGCTGAGAAGAATTTTAAACCAGGACCCTTTTATCTAGGGAGAGCAAGAAGGCCAGTCTGCTTAGTAGCCTTCCTGTGGATATGTTATACCTGTTCAGCCTTCTTGTTGCCAACTGTCTACCCTATCACATGGGACACTTTCAACTATGCGCCAGTGGCTCTTGGCCTGGTTCTCTCACTGGTCATGCTATGGTGGGTTTTGGATGCAAGGAAGTGGTTCAAGGGGCCGGTTCGAAATATTGATTTTCAAAATTTCAAATCATTGAAAACCTTCATGTAG 1776 0.4617 MSFIIYFALNDIRVFICRFVYYCLATGLIKSNSSKIKTWNRCKAWSVLVAVALSILHQQTVVAMKVFNAESGALEMDSGEKRLNELGYKQELRREMTLFKTLAITFSSMAVFTGTPLYGSCLRYAGPASLIWGWVVVTFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPRWGPFASWCCAWLEAIGLISGIGAQAFSGSQALQFIILLATGNNKGGGYFASKGVFLGMYVGLTIIWAVLNTFALQVVAFLSIISIWWQILGGLVVIIMLPLVARPTQSASYVFTHFETAPESTGISSKPYAVILSVLLSNYCLYGYDTAAHLTEETKGADRTGPIAILSSIGIISFFGWAYNLALTFSIQDPNYLYDPNNETGGGLVPAQIIYDAFHRRYQSATGAVVFMCIIWGSFFFCGLSVTASAARVVYALSRDKGIPFSPIWRKIHPKYKVPRNAVWLCAVIGMLLGLPILKLDVIFTAIISISTIGWVGGYAVPIFARLVMAEKNFKPGPFYLGRARRPVCLVAFLWICYTCSAFLLPTVYPITWDTFNYAPVALGLVLSLVMLWWVLDARKWFKGPVRNIDFQNFKSLKTFM* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0247 591 ProSitePatterns Amino acid permeases signature. 125 156 IPR004840 GO:0006865|GO:0016020|GO:0055085
Vvi18g0247 591 PANTHER AMINO-ACID PERMEASE BAT1 71 580 - -
Vvi18g0247 591 PIRSF AA_transporter 80 584 - -
Vvi18g0247 591 Pfam Amino acid permease 98 554 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi18g0247 591 Gene3D Amino acid/polyamine transporter I 91 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0247 Vvi-Chr18 2352063 2359074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0247 144 579 Organic Solute Cotransporters AT2G01170 43.249 8.71e-113 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0247 - - vvi:100243841 1033.09