Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0245 ATGGTGGCATGTGGCTTCTGGGTGTGCCGCGTGGTCGTCGTCGACATGAATCCCTCCTATTCTTCGACCACCGGAGTCTCCAATCTCACCCCCTACAAACTTCCTCCGTTCTTCACTTCCAGGAGCGCCGTCAAGCTTTTCGGGTTTGGTTCTCAGAGGAAGTCCCATCTCAGGAGACGTCTTAAGCTTGTTGTGAGCGCTGAGCTCTCCAAACCTTTCTCTCTCAGCTTCGGTTTGGACTCTCAGGCCTTCCGGTCTCATGATCTATCACAGTTGCCTTGGATTGGTCCAGTTCCTGGGGATATTGCAGAGGTTGAGGCATACTGTAGAATATTTCGAGCTGCCGAGTGGCTTCATTGTGCATTAATGGACACATTATGCAATCCATTAACTGGAGAATGTAGTGTTTCATATGATTTCACATCTGAGGAAAAACCATTATTGGAAGATAAGATAGTGTCTGTGCTTGGTTGCATGCTGTCTCTCCTAAACAAGGGAAGGGAGGATGTTCTCTCTGGAAGATCATCCATCATGAGTTCCTTTCGTGTTGCAGATGTAAGTGCAATGGAGGACAAACTTCCACCACTTGCCATTTTTCGGGGTGAGATGAAAAGGTGTTGCGAGAGCTTGCACTTTGCTCTTGAGAACTATTTGACACCTGATGATGATCGAAGCTTTGATGTATGGAGGAAACTGCAGAGGCTGAAAAATGTCTGCTATGATTCTGGTTTTCCACGTGGTGATGATTATCCCAGCCATATGCTCTTTGCAAACTGGAATCCTGTTTATTTATCCACTTCAAAAGAAGATACAGAATCTAAGGAGGCAGCTTTTTGGAGTGGTGGCCAGGTGACAGAGGAAGGTTTGAAATGGTTAATTGATAAAGGATATAAAACTATTGTAGATCTTAGAGCAGAGAATGTGAAGGATATTTTCTATGAAGCAGTGGTACATGATGCTGTTTTGTCTGGAAAAGTTGAATTGGTCAAATTTCCAGTTGAAGCTCGTACTGCACCTTCAATGGAGCAGGTTGAGAAGTTTGCATCTTTGGTTTCAGACTCCAGCAAAAAGCCCATCTATCTTCACAGTAAAGAAGGAGCGTGGAGAACTTCTGCTATGGTTTCCAGATGGAGACAGTACATGGCTCGGTCTGCACTGCAGCTTGTCTCTAATCAACCAATCGTTCCCAATGAAATTCTATCACGAGATCCTGATGGAAGGGAAGAACTGCACGTGCTTTCAGATGTCAGAGAAAGTAAATCCCTGAAGGATGAAACTGAGTCTCTACAACAGAGTTCAGATATAATTAATAGTTCCAATGGAGTATTTCATGAACAGGCCTCTCGAGTATTCGATAACAAAGAGGAGAGCAGTAATGGTGCCTATAATAGCCATTCTAGTCAAGGTATGGCATCAATTAAAAAAATTGATAATGGGGTAGGGTCTCAGGTGAGCTTCTGCCGGGAAATTGATCCTCTAAAGTCTCAGTTTCCTCCTTGTGATGTATTCTCCAAAAAAGAGATGTCCAGGTTTCTTAGAAGTAAAAAGATCACCCCCCCAACTTATTTGAATTATCAACAGAAAGGATTTGAGAATTTGCCAGTTTTAGGAGAGACATACATTGGGACAAGGCAGAGGAGTAAAACCAATGGCACTGGTTCTGCATCAAGGCTTGTGGAGACAGGTGGTTCCAATGGGTCTCTTAGTCATTCAAATGTATCTCCCAAGGCTCAGAGCTCAGCTGCTGCTAATGGGGCACTTAAGAATGATGATAGTTGTGTTTCTGTTGGTTCAACTGTGAATGGATTTTATAAAGGGGAAAGGTGTTCCATGACTGGGTCTGATGGCTCTAGCTTTGTAAATAACAAATTAAATAAGGATGCTACATCTACAACCGTTAGGGAGGATCAGAAAAGCCATGACAAGGCCTCCATAGTTTCAGGTGATGATGTCTTGGGACAGATTGAAGGAAATATGTGTGCTTCTACAACAGGGGTTGTGAGGGTTCAGTCCAGAAAGAAAGCAGAGATGTTCTTAGTTCGCACTGATGGATTCTCATGTACTAGAGAAAAGGTAACTGAATCCTCCTTGGCCTTCACTCATCCCAGTACCCAGCAACAGATGCTTATGTGGAAATCTACACCAAAGACTGTATTATTGTTGAAGAAGCTAGGACAAGCACTAATGGAAGAAGCTAAAGAGATTGCCTCTTTTTTGTTTTACCAAGAGAAGATGAATGTTCTTGTTGAACCAGAAGTGCATGACATATTTGCAAGAATCCCGGGTTTTGGATTTGTTCAAACTTTCTATAGTCAAGATACCAGTGATCTTCATGAGAGGGTTGATTTTGTGGCTTGCTTGGGAGGAGATGGCGTTATACTCCATGCATCAAATCTATTTAGAGATGCTGTTCCCCCTGTTGTATCGTTTAATCTTGGATCTCTTGGATTTCTCACATCCCATACATTTGAAGACTACAGGCAGGACTTAAGACAAATCATCCATGGGAACAGCACACTGGATGGCGTTTATATAACTCTGAGAATGCGTCTCCGTTGTGAAATTTTTCGAAATGGAAATGCCATGCCTGGGAAAATATTTGATGTCATGAATGAGATTGTTGTTGATCGTGGCTCCAACCCGTACCTATCTAAGATTGAATGTTATGAACATGATCGCCTTATAACCAAGGTGCAAGGTGATGGAGTAATAGTTGCCACACCTACAGGGAGTACTGCTTACTCAACAGCTGCTGGAGGTTCCATGGTGCATCCAAATGTTCCATGCATGCTGTTTACTCCAATTTGCCCACACTCCCTCTCATTTAGACCTGTTATACTTCCAGATTCTGCAAGGCTTGAGTTAAAGATCCCGAAGGATGCACGAAGCAATGCATGGGTTTCATTTGATGGAAAGAGAAGGCAGCAACTCTCGAGAGGAGATTCTGTTAGAATATCCATGAGCCAGCACCCTCTCCCAACTGTCAACAAATCTGATCAAACTGGTGATTGGTTCCACAGCTTGGTCCGTTGCCTGAACTGGAACGAAAGGCTTGATCAGAAGCCCTTTGAAGCCTCCAAATAA 3084 0.4332 MVACGFWVCRVVVVDMNPSYSSTTGVSNLTPYKLPPFFTSRSAVKLFGFGSQRKSHLRRRLKLVVSAELSKPFSLSFGLDSQAFRSHDLSQLPWIGPVPGDIAEVEAYCRIFRAAEWLHCALMDTLCNPLTGECSVSYDFTSEEKPLLEDKIVSVLGCMLSLLNKGREDVLSGRSSIMSSFRVADVSAMEDKLPPLAIFRGEMKRCCESLHFALENYLTPDDDRSFDVWRKLQRLKNVCYDSGFPRGDDYPSHMLFANWNPVYLSTSKEDTESKEAAFWSGGQVTEEGLKWLIDKGYKTIVDLRAENVKDIFYEAVVHDAVLSGKVELVKFPVEARTAPSMEQVEKFASLVSDSSKKPIYLHSKEGAWRTSAMVSRWRQYMARSALQLVSNQPIVPNEILSRDPDGREELHVLSDVRESKSLKDETESLQQSSDIINSSNGVFHEQASRVFDNKEESSNGAYNSHSSQGMASIKKIDNGVGSQVSFCREIDPLKSQFPPCDVFSKKEMSRFLRSKKITPPTYLNYQQKGFENLPVLGETYIGTRQRSKTNGTGSASRLVETGGSNGSLSHSNVSPKAQSSAAANGALKNDDSCVSVGSTVNGFYKGERCSMTGSDGSSFVNNKLNKDATSTTVREDQKSHDKASIVSGDDVLGQIEGNMCASTTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSTPKTVLLLKKLGQALMEEAKEIASFLFYQEKMNVLVEPEVHDIFARIPGFGFVQTFYSQDTSDLHERVDFVACLGGDGVILHASNLFRDAVPPVVSFNLGSLGFLTSHTFEDYRQDLRQIIHGNSTLDGVYITLRMRLRCEIFRNGNAMPGKIFDVMNEIVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPKDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKSDQTGDWFHSLVRCLNWNERLDQKPFEASK* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0245 1027 Gene3D Protein tyrosine phosphatase superfamily 270 397 IPR029021 -
Vvi18g0245 1027 Pfam ATP-NAD kinase C-terminal domain 870 996 - -
Vvi18g0245 1027 Pfam ATP-NAD kinase N-terminal domain 772 836 IPR002504 GO:0003951|GO:0006741
Vvi18g0245 1027 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 719 1018 IPR016064 -
Vvi18g0245 1027 PANTHER NAD KINASE 327 1024 - -
Vvi18g0245 1027 Gene3D - 850 990 IPR017437 GO:0003951|GO:0019674
Vvi18g0245 1027 FunFam NAD kinase 2, chloroplastic 705 868 - -
Vvi18g0245 1027 Hamap NAD kinase [nadK]. 716 1014 IPR002504 GO:0003951|GO:0006741
Vvi18g0245 1027 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 278 382 IPR029021 -
Vvi18g0245 1027 MobiDBLite consensus disorder prediction 544 582 - -
Vvi18g0245 1027 FunFam NAD kinase 2, chloroplastic 850 990 - -
Vvi18g0245 1027 Gene3D - 705 1015 IPR017438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0245 Vvi-Chr18 2336971 2345023 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0245 K00858 - vvi:100266161 2065.04