Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0234 ATGGCGTCCGTGGTCGGATCGACCACAGAGAAGTTGTCGAAGCTCGACATAAATGGAGAATCGATTTTTTCTGTTCCAAATCTGCACAAGAATCTCTCCATTCTCTCCCCTGACCAGATTAAGCTTGCGAGGATGTTGGTGGAGGCCGGGCAGAGTCATTTGTTTCAAAGCTGGGCGGAGCCCGGTGTTGAGGATGAAGAAAAGAGAGGTTTCTTTGAACAGGTGGCTCGACTTAATGCTAGCTATCCAGGAGGTTTGACATCATATATTAAAACAGCAAGAGAACTCTTAGCAGATTCAAAGGCCGGAAAGAACCCATTTGATGGCTTTACACCTTCTGTTCCAACAGGAGAGGTTCTAACTTATGGTGATGATAACTTCGTCAATTTTGAGGAACTAGGCATCAGAGAAGCACGGAATGCTGTATTTGTTCTGGTTGCAGGTGGCCTTGGGGAGCGTCTTGGATATAATGGAATTAAGCTAGCTCTTCCATCAGAGACCACTATGGGGACATGTTTCTTACAAAATTATATCGAGTCTATTCTAGCTCTTCAAGATGCTAGCTGTCGGCTGGTACAAGGCTACAATCATATCCTGAGGATGCCACAATCAACCATTCCAACAAAAAGGGTTTCTGCTTCAATAGCTAAGACAAAACTTGGTGGTGGATGTCAAAATCAGATTCCATTGGTTATAATGACATCAGATGACACGCATGCACGCACAATAGAACTGTTAGAATCAAATGCTTATTTTGGAATGGAACCTAGTCAAGTAAAGCTTCTAAAGCAGGAAAAAGTTGCATGCTTAGACGATAATGATGCCAGGCTTGCAGTGGACCCAAAAAGCAAATACAGAATTCAGACAAAACCTCATGGCCATGGTGATGTGCATTCACTTCTTTATTCCAGTGGTCTTCTCAATATATGGTATGATGCTGGTTTGAGATGGGTTCTGTTTTTCCAAGATACAAATGGACTTCTGTTCAAGGCAATTCCAGCTGCTTTGGGTGTGAGCTCCTCCAAACTATATGATGTTAATTCTCTTGCTGTTCCACGCAAAGCAAAAGAAGCTATTGGAGGAATTACCAAGCTTACTCATGCTGATGGGAGGACAATGGTGATCAATGTGGAATACAATCAGCTCGATCCTCTACTAAGAGCAACTGGACATCCTGATGGTGACGTCAATTGTGAGACAGGATACTCTCCTTTCCCTGGAAATATAAACCAATTGATTTTGAAGCTTGGTCCTTATATCAAGGAACTCACTAAAACAGGAGGAGCCATAAAGGAGTTTGTTAACCCGAAATACAAAGATTCAAGTAAAACTTCATTTAAGTCCTCAACTCGATTAGAGTGTATGATGCAAGACTATCCAAAAACGTTGCCTCCATCAGCAAGGGTTGGATTTACAGTGATGGATGCATGGCTTGCTTATGCACCTGTGAAAAACAACCCTGAGGATGCTGCTAAGGTACCAAAGGGAAATCCATATCATAGTGCAACTTCTGGGGAAATGGCCATATATCGGGCAAACAGCCTCATCCTCAGAAAGGCTGGTGGTGTTCAAATAGATGATCCAGTACAGGAGGTCTTCAATGGACAAGAGATGGAAGTGTGGCCACGAATCACATGGAAGCCAATATGGGGACTGACATTTTCAGAGATTAAAAGAAAAATCAGTGGAAGCTGCTCTATTTCTCAGAGGTCTACCTTGGTTATTAAGGGCTGTAACATCTTTCTTGAGGATCTCTCCTTGGATGGAACTCTTGTTGTCAACTCTGTTGAAGATGCTGAGGTCAAAGTGGGAGGCGTGGTGCAAAACAAGGGTTGGATTCTGGAAAAAGTTGACTATAAAGATACTACAGTGCCTGAGGAGGTAAGGACCAGGGGGTTCAGAATCAAAAAAGTAGAGCAGCTGGAAAAGAATTAG 1935 0.4295 MASVVGSTTEKLSKLDINGESIFSVPNLHKNLSILSPDQIKLARMLVEAGQSHLFQSWAEPGVEDEEKRGFFEQVARLNASYPGGLTSYIKTARELLADSKAGKNPFDGFTPSVPTGEVLTYGDDNFVNFEELGIREARNAVFVLVAGGLGERLGYNGIKLALPSETTMGTCFLQNYIESILALQDASCRLVQGYNHILRMPQSTIPTKRVSASIAKTKLGGGCQNQIPLVIMTSDDTHARTIELLESNAYFGMEPSQVKLLKQEKVACLDDNDARLAVDPKSKYRIQTKPHGHGDVHSLLYSSGLLNIWYDAGLRWVLFFQDTNGLLFKAIPAALGVSSSKLYDVNSLAVPRKAKEAIGGITKLTHADGRTMVINVEYNQLDPLLRATGHPDGDVNCETGYSPFPGNINQLILKLGPYIKELTKTGGAIKEFVNPKYKDSSKTSFKSSTRLECMMQDYPKTLPPSARVGFTVMDAWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILRKAGGVQIDDPVQEVFNGQEMEVWPRITWKPIWGLTFSEIKRKISGSCSISQRSTLVIKGCNIFLEDLSLDGTLVVNSVEDAEVKVGGVVQNKGWILEKVDYKDTTVPEEVRTRGFRIKKVEQLEKN* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0234 644 CDD UGGPase 141 487 - -
Vvi18g0234 644 Pfam UTP--glucose-1-phosphate uridylyltransferase 139 318 IPR002618 GO:0070569
Vvi18g0234 644 FunFam UDP-sugar pyrophosphorylase 523 643 - -
Vvi18g0234 644 Gene3D - 523 642 - -
Vvi18g0234 644 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 26 630 IPR039741 -
Vvi18g0234 644 SUPERFAMILY Nucleotide-diphospho-sugar transferases 40 595 IPR029044 -
Vvi18g0234 644 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 36 521 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0234 K12447 - vvi:100259254 1212.98